Factsheet for PGSC0003DMT400079342

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050981	Potato	cytosol	34.16	67.3
PGSC0003DMT400008852	Potato	mitochondrion	34.16	66.22
PGSC0003DMT400043990	Potato	cytosol	33.75	64.72
PGSC0003DMT400051008	Potato	cytosol	27.52	62.19
PGSC0003DMT400043956	Potato	cytosol	78.98	57.68
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	78.28	56.88
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	74.14	54.86
PGSC0003DMT400079343	Potato	cytosol	46.47	52.83
PGSC0003DMT400024123	Potato	plasma membrane	70.82	51.82
PGSC0003DMT400076092	Potato	cytosol	53.11	49.48
PGSC0003DMT400024060	Potato	cytosol	28.08	48.92
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	69.43	48.74
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	42.19	48.18
PGSC0003DMT400046505	Potato	plasma membrane	45.92	47.36
PGSC0003DMT400024057	Potato	vacuole	44.67	46.54
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	36.65	46.49
PGSC0003DMT400054250	Potato	cytosol	35.82	45.84
PGSC0003DMT400006336	Potato	cytosol	33.89	44.63
PGSC0003DMT400051007	Potato	cytosol	25.86	40.92
KRH74677	Soybean	cytosol	24.48	40.14
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	21.44	37.35
PGSC0003DMT400024063	Potato	cytosol	27.11	36.64
PGSC0003DMT400012963	Potato	cytosol	51.31	32.57
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	35.96	31.98
TraesCS7D01G018400.1	Wheat	cytosol	13.0	29.28
KRH75154	Soybean	cytosol	35.55	29.01
TraesCS5B01G034500.1	Wheat	cytosol	18.4	28.98
TraesCS5B01G309200.1	Wheat	cytosol	17.43	28.64
TraesCS7B01G024800.1	Wheat	cytosol, plastid	15.49	27.86
Os08t0542200-01	Rice	cytosol	18.67	27.78
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	16.6	27.71
KRH11738	Soybean	cytosol	35.41	27.65
TraesCS5B01G034600.1	Wheat	cytosol	17.29	27.59
KRH69426	Soybean	cytosol	33.61	27.49
KRH70781	Soybean	cytosol	22.41	27.36
KRH12679	Soybean	nucleus	38.17	27.33
KRH69474	Soybean	cytosol	28.35	27.01
KRH25740	Soybean	cytosol	34.72	26.9
KRH36732	Soybean	cytosol	37.07	26.64
KRH11739	Soybean	cytosol	37.07	26.56
TraesCS7D01G017900.1	Wheat	cytosol	13.55	26.27
KRH36734	Soybean	plasma membrane	36.24	26.02
KRH69482	Soybean	cytosol	30.57	25.73
KRH74673	Soybean	cytosol	30.84	25.63
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	13.0	25.61
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	15.35	24.78
TraesCS7D01G018500.1	Wheat	cytosol	18.95	24.46
HORVU7Hr1G002290.1	Barley	cytosol	21.58	23.89
PGSC0003DMT400028851	Potato	cytosol	13.55	23.73
PGSC0003DMT400017408	Potato	cytosol	36.38	23.67
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	19.23	22.98
PGSC0003DMT400028882	Potato	cytosol	8.85	22.7
TraesCS7B01G024600.1	Wheat	cytosol	19.23	22.53
TraesCS7D01G017600.1	Wheat	cytosol	23.65	22.15
TraesCS7D01G018200.1	Wheat	cytosol	26.14	22.13
PGSC0003DMT400008029	Potato	cytosol	35.82	21.99
HORVU7Hr1G000890.2	Barley	cytosol	27.11	21.85
PGSC0003DMT400017461	Potato	cytosol	34.72	21.6
KRH76379	Soybean	cytosol	16.32	21.22
TraesCS3B01G497800.1	Wheat	cytosol	28.35	21.2
TraesCS7D01G122800.1	Wheat	cytosol	20.89	21.0
TraesCS7D01G017300.1	Wheat	plasma membrane	21.16	20.82
HORVU7Hr1G002260.2	Barley	cytosol	29.88	20.79
TraesCS7D01G122700.1	Wheat	cytosol	29.6	20.56
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	25.73	20.46
TraesCS7D01G122900.1	Wheat	cytosol	29.46	20.08
PGSC0003DMT400044170	Potato	cytosol	30.15	19.93
TraesCS7D01G017700.1	Wheat	cytosol	31.67	19.9
Os08t0543500-01	Rice	cytosol, plastid	31.67	19.86
PGSC0003DMT400021631	Potato	cytosol	27.94	19.84
TraesCS7D01G018000.1	Wheat	cytosol	31.54	19.77
HORVU7Hr1G000950.1	Barley	cytosol	14.8	19.71
Os08t0543100-00	Rice	cytosol	32.23	19.68
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	20.19	19.68
TraesCS7B01G024900.1	Wheat	cytosol	29.6	19.65
HORVU7Hr1G026360.1	Barley	extracellular	29.18	19.5
OQU80806	Sorghum	cytosol	31.12	19.46
TraesCS7D01G018700.1	Wheat	cytosol	19.09	19.44
Os05t0380300-01	Rice	plasma membrane	33.75	19.38
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	31.81	19.38
Os08t0543050-00	Rice	cytosol, plastid	32.37	19.34
EES14172	Sorghum	cytosol	31.81	19.31
PGSC0003DMT400049255	Potato	cytosol	24.62	19.31
TraesCS7B01G024700.1	Wheat	cytosol	28.63	19.22
TraesCS7D01G000900.1	Wheat	plasma membrane	29.18	19.09
EES14143	Sorghum	cytosol	30.84	19.08
HORVU7Hr1G000760.3	Barley	cytosol	25.17	18.96
Zm00001d031711_P001	Maize	cytosol	31.26	18.91
TraesCS5D01G398100.1	Wheat	cytosol	31.4	18.82
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	25.17	18.7
TraesCS5D01G031100.1	Wheat	mitochondrion	20.06	18.69
PGSC0003DMT400021294	Potato	cytosol	15.49	18.57
TraesCS7D01G123000.1	Wheat	cytosol, plastid	29.46	18.43
PGSC0003DMT400022156	Potato	cytosol	31.81	18.17
OQU80781	Sorghum	cytosol, extracellular, nucleus	29.88	18.17
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	31.26	18.02
TraesCS7B01G339900.1	Wheat	plasma membrane	30.71	17.98
PGSC0003DMT400021607	Potato	cytosol	11.76	17.93
PGSC0003DMT400049984	Potato	cytosol	30.15	17.88
PGSC0003DMT400011301	Potato	cytosol	30.98	17.68
PGSC0003DMT400022154	Potato	cytosol	30.15	17.61
PGSC0003DMT400056053	Potato	cytosol	26.83	17.45
HORVU5Hr1G006710.5	Barley	cytosol	30.57	17.44
PGSC0003DMT400071966	Potato	nucleus	29.88	17.41
PGSC0003DMT400028879	Potato	extracellular	8.02	17.16
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	17.57	17.14
PGSC0003DMT400028691	Potato	cytosol	30.57	17.13
PGSC0003DMT400021634	Potato	cytosol	30.01	17.05
PGSC0003DMT400065971	Potato	cytosol	22.55	16.94
PGSC0003DMT400011307	Potato	cytosol	9.41	16.79
PGSC0003DMT400028871	Potato	cytosol	10.51	16.7
PGSC0003DMT400028843	Potato	cytosol	15.63	14.27

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1D1N3	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG401030883	PGSC:PGSC0003DMG401030883	EnsemblPlants:PGSC0003DMT400079342
PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF863	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000295148F	SEG:seg	:	:	:	:

Description

Late blight resistance protein Rpi-pta1 [Source:PGSC_GENE;Acc:PGSC0003DMG401030883]

Coordinates

chr8:-:48381495..48386563

Molecular Weight (calculated)

82550.2 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.243

Length

723 amino acids

Sequence
(BLAST)

001: MFSTIQAVLE DAQEKQLNDK PIENWLQKLN AATYEVDDIL DEYKTKATRF LQSEYGRYHP KAIPFRHKVG KRMDQVMKIL NAIAEERKNF HLQEKIIERQ
101: AATRETVSDA QKHSVLPTLG MGGLGKTTLS QMVFNDQRVT EHFYPKLWIC VSDDFDEKRL IKAIVESIEG KSLSDMDLAP LQKKLQELLN GKRYLLVLDD
201: VWNEDQQKWA NLRAVLKVGA SGAFVLTTTR LEKDCWFLFI QRAFGHQEEI NPNLVAIGKE IVKKCGGVPL AAKTLGGILR FKREEREWEH VRDSAIWNLP
301: QDESSILPAL RLSYHHLPLD LRQRFVYCVV FPKDTKMAKE NLITFWMARG FLLSKGNLEL EVEKGYQLGE LKNLNLYGSI SIIKLERVKK ERDAKEANLS
401: AKANLHSLRL SWDFDGTHRY ESEVREALKS HPNLKYLEII GFGGIRLPDW MNQSVLKKVV SITIRGCENC SSLLPFGELP CLESLELQSG CVEYVDVDVD
501: SGRFPSLRKL VIWGFDNLKG LLKNEGEEQF PELEKIMINW CPVLIIPTLP SVKKLNVYVT DATGLRSISN LRALTSLGIR YNLEAISLPE EMFKSLVNLK
601: YLKISEFYNL KELPSSLASL SEFYNLKELP SSLASLNALQ SLKIDDCNAL ESLPEEGVKG LTSLTELSLQ YCQMLKCLPE GLQHLTALTT LTITQCPIVF
701: KRCEKGIGED WHKIAHIPYL DIE

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.