Factsheet for PGSC0003DMT400079272

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051008	Potato	cytosol	26.33	81.88
PGSC0003DMT400050981	Potato	cytosol	29.35	79.56
PGSC0003DMT400043956	Potato	cytosol	79.1	79.49
PGSC0003DMT400079343	Potato	cytosol	50.75	79.4
PGSC0003DMT400024060	Potato	cytosol	32.86	78.8
PGSC0003DMT400051007	Potato	cytosol	35.98	78.34
PGSC0003DMT400079342	Potato	cytosol	56.88	78.28
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	32.16	77.11
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	47.74	75.04
PGSC0003DMT400046505	Potato	plasma membrane	52.56	74.61
PGSC0003DMT400043990	Potato	cytosol	28.24	74.54
PGSC0003DMT400006336	Potato	cytosol	41.11	74.5
PGSC0003DMT400008852	Potato	mitochondrion	27.74	73.99
PGSC0003DMT400024123	Potato	plasma membrane	73.47	73.99
PGSC0003DMT400054250	Potato	cytosol	42.01	73.98
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	72.46	73.8
PGSC0003DMT400024057	Potato	vacuole	51.46	73.78
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	41.41	72.28
PGSC0003DMT400076092	Potato	cytosol	53.87	69.07
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	71.26	68.83
PGSC0003DMT400024063	Potato	cytosol	35.38	65.79
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	42.61	52.15
KRH74677	Soybean	cytosol	21.61	48.75
PGSC0003DMT400012963	Potato	cytosol	50.65	44.25
KRH75154	Soybean	cytosol	38.39	43.12
KRH69426	Soybean	cytosol	36.68	41.29
KRH70781	Soybean	cytosol	24.52	41.22
KRH11738	Soybean	cytosol	37.89	40.71
KRH69482	Soybean	cytosol	33.97	39.35
KRH74673	Soybean	cytosol	34.37	39.31
KRH36734	Soybean	plasma membrane	39.4	38.93
KRH12679	Soybean	nucleus	39.5	38.91
KRH76379	Soybean	cytosol	21.61	38.67
KRH36732	Soybean	cytosol	38.99	38.57
KRH11739	Soybean	cytosol	38.79	38.26
KRH25740	Soybean	cytosol	35.38	37.73
TraesCS5B01G034600.1	Wheat	cytosol	16.08	35.32
Os08t0542200-01	Rice	cytosol	17.19	35.19
KRH69474	Soybean	cytosol	26.83	35.18
TraesCS5B01G309200.1	Wheat	cytosol	15.38	34.77
HORVU7Hr1G002290.1	Barley	cytosol	22.71	34.61
TraesCS7B01G024800.1	Wheat	cytosol, plastid	13.87	34.33
PGSC0003DMT400028879	Potato	extracellular	11.66	34.32
TraesCS5B01G034500.1	Wheat	cytosol	15.68	33.99
TraesCS7D01G017600.1	Wheat	cytosol	26.03	33.55
TraesCS7D01G018400.1	Wheat	cytosol	10.65	33.02
TraesCS7D01G017900.1	Wheat	cytosol	12.26	32.71
TraesCS7D01G122800.1	Wheat	cytosol	23.62	32.68
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	14.17	32.56
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	11.96	32.43
PGSC0003DMT400011307	Potato	cytosol	13.17	32.35
TraesCS7D01G018500.1	Wheat	cytosol	18.19	32.32
TraesCS7D01G018200.1	Wheat	cytosol	27.74	32.32
PGSC0003DMT400017408	Potato	cytosol	36.08	32.31
PGSC0003DMT400021607	Potato	cytosol	15.18	31.86
TraesCS7D01G018700.1	Wheat	cytosol	22.71	31.83
HORVU7Hr1G000950.1	Barley	cytosol	17.19	31.49
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	22.81	30.59
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	13.77	30.58
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	18.59	30.58
PGSC0003DMT400028871	Potato	cytosol	13.87	30.33
TraesCS3B01G497800.1	Wheat	cytosol	29.15	29.99
TraesCS7B01G024600.1	Wheat	cytosol	18.59	29.98
PGSC0003DMT400008029	Potato	cytosol	35.38	29.88
PGSC0003DMT400017461	Potato	cytosol	34.47	29.52
HORVU7Hr1G000890.2	Barley	cytosol	26.33	29.21
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	26.43	28.93
PGSC0003DMT400021294	Potato	cytosol	17.39	28.69
TraesCS7D01G122700.1	Wheat	cytosol	29.75	28.43
PGSC0003DMT400049255	Potato	cytosol	26.23	28.31
TraesCS7D01G122900.1	Wheat	cytosol	30.15	28.28
PGSC0003DMT400044170	Potato	cytosol	31.06	28.25
HORVU7Hr1G026360.1	Barley	extracellular	30.45	28.0
PGSC0003DMT400021631	Potato	cytosol	28.54	27.9
PGSC0003DMT400028851	Potato	cytosol	11.56	27.84
HORVU7Hr1G002260.2	Barley	cytosol	28.94	27.72
TraesCS7B01G024900.1	Wheat	cytosol	29.85	27.27
TraesCS7D01G017300.1	Wheat	plasma membrane	19.9	26.94
TraesCS7D01G017700.1	Wheat	cytosol	31.16	26.93
TraesCS7D01G018000.1	Wheat	cytosol	31.16	26.89
Os05t0380300-01	Rice	plasma membrane	33.97	26.85
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	31.96	26.79
TraesCS7B01G024700.1	Wheat	cytosol	28.94	26.74
HORVU7Hr1G000760.3	Barley	cytosol	25.73	26.67
PGSC0003DMT400028882	Potato	cytosol	7.54	26.6
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	19.8	26.59
OQU80806	Sorghum	cytosol	30.65	26.38
Os08t0543500-01	Rice	cytosol, plastid	30.35	26.19
Os08t0543100-00	Rice	cytosol	31.16	26.18
TraesCS7D01G123000.1	Wheat	cytosol, plastid	30.35	26.12
EES14143	Sorghum	cytosol	30.65	26.09
EES14172	Sorghum	cytosol	31.06	25.94
TraesCS5D01G398100.1	Wheat	cytosol	31.16	25.7
Os08t0543050-00	Rice	cytosol, plastid	31.16	25.62
TraesCS7D01G000900.1	Wheat	plasma membrane	28.14	25.34
OQU80781	Sorghum	cytosol, extracellular, nucleus	30.25	25.32
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	31.86	25.28
Zm00001d031711_P001	Maize	cytosol	30.25	25.19
PGSC0003DMT400049984	Potato	cytosol	30.65	25.02
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	24.42	24.97
PGSC0003DMT400071966	Potato	nucleus	31.06	24.9
PGSC0003DMT400022156	Potato	cytosol	31.66	24.88
PGSC0003DMT400022154	Potato	cytosol	30.75	24.72
PGSC0003DMT400028691	Potato	cytosol	31.46	24.26
TraesCS5D01G031100.1	Wheat	mitochondrion	18.89	24.23
PGSC0003DMT400056053	Potato	cytosol	27.04	24.19
PGSC0003DMT400011301	Potato	cytosol	30.75	24.15
HORVU5Hr1G006710.5	Barley	cytosol	30.65	24.07
TraesCS7B01G339900.1	Wheat	plasma membrane	29.75	23.97
PGSC0003DMT400021634	Potato	cytosol	29.95	23.41
PGSC0003DMT400065971	Potato	cytosol	22.21	22.97
PGSC0003DMT400028843	Potato	cytosol	17.59	22.1

Protein Annotations

EntrezGene:102579076	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M1D1J6	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400030855
PGSC:PGSC0003DMG400030855	EnsemblPlants:PGSC0003DMT400079272	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155	PANTHER:PTHR23155:SF863
InterPro:RX-like_CC	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295C331	RefSeq:XP_006364463.1
SEG:seg	:	:	:	:	:

Description

Disease resistance protein RGA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400030855]

Coordinates

chr8:+:48131776..48135560

Molecular Weight (calculated)

113135.0 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.237

Length

995 amino acids

Sequence
(BLAST)

001: MAEALLQVVL DNLTSFLKGE LVLLFGLQNE FQKLSSIFST IQSVLEDAQE KQFNDKPLEN WLQKLNVATY EVDDILDEYK TKATRFSQSA YGRYHPKAIP
101: FCHKVGKRMD QVMKTLDAIA EERRNFHLQE KIIERQAARR ETGSILTEPQ VYGRDKEEDE IVKILINNVS NAQQLSVLPI LGMGGLGKTT LAQMVFNDQR
201: VTEHIHPKIW VCVSDNFDEK RLMKTIIGNI ERSSLDIEDL ASLQEKLQEL LNGKRYFLVL DDVWNEDQQK WDNLRAVLKV GASGASVLTT TRLEKVGSIM
301: GTLQPYELSN MSQEDCWLLF IQRAFGHQEE INPYLVAIGK EIVKKCGGVP LAAKTLGGIL RFKREEREWE RVRDSEIWNL PQDESSILPA LRLSYHNLPL
401: DLRQCFVYCA VFPKDTEMEK ENLIAIWMAH GFLLSKGHLE LEDVGNEVWK ELYLRSFFQE IEVKSGKTYF KMHDLIHDLA TSLFSANTSS SNIREINVKS
501: YTHMMSIGFA EVVSVSPYYP LSLEQFVSLR VLNLSYSKLD QLPSSIGDLV HLRYLNLSGN GRISSLPKQL CKLQNLQTLD LQYCTSLCYL PKKTSKLGSL
601: QNLLLDKCYA LISMPPWIGS LTRLRILDCF VIGKRKSCQP GELRNLNLYG SVVITHLERV KNNRDAKEAN LSAKANLQSL SMCWDNNGPH RYESEEVKVL
701: EALKPHPNLK YLYLTGFRGF RLADWMNHSV LKNVVSIVIE GCENCSCLPP FGELPCLESL VLHKGSAEVE YVEEDNIDVH SGSPTRIRFP SLRKLTVAKF
801: RNLKGLLKKE GEEQFPVLEE VEIEQCPVFV IPTLSSVKKL EIAREADATG FRSISNLRDL TSLYISDNEE ATSLPEEMFK NLANLKDLTI SEFKNLKKLP
901: TSLATLNALK SLKIECCGAL ESLPEEGLEG LTSLTELSLQ YCEMLKCLPE GLQYLTALTS LTVEGCPEVE KRCEKGIGED WHKIAHIPNL HIRNY

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.