Factsheet for PGSC0003DMT400011301

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011307	Potato	cytosol	27.94	87.41
PGSC0003DMT400022156	Potato	cytosol	80.51	80.57
PGSC0003DMT400021631	Potato	cytosol	62.9	78.29
PGSC0003DMT400021607	Potato	cytosol	29.28	78.27
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	22.49	77.66
PGSC0003DMT400028879	Potato	extracellular	20.6	77.22
PGSC0003DMT400021294	Potato	cytosol	36.31	76.29
PGSC0003DMT400065971	Potato	cytosol	57.62	75.88
PGSC0003DMT400071966	Potato	nucleus	74.27	75.83
PGSC0003DMT400049984	Potato	cytosol	72.69	75.55
PGSC0003DMT400022154	Potato	cytosol	73.8	75.53
PGSC0003DMT400028843	Potato	cytosol	47.04	75.25
PGSC0003DMT400028691	Potato	cytosol	75.37	74.03
PGSC0003DMT400056053	Potato	cytosol	64.88	73.92
PGSC0003DMT400028851	Potato	cytosol	23.91	73.37
PGSC0003DMT400049255	Potato	cytosol	53.2	73.1
PGSC0003DMT400021634	Potato	cytosol	73.01	72.66
PGSC0003DMT400028882	Potato	cytosol	15.94	71.63
PGSC0003DMT400028871	Potato	cytosol	22.97	63.96
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	41.67	42.11
PGSC0003DMT400024060	Potato	cytosol	11.68	35.66
PGSC0003DMT400051007	Potato	cytosol	12.55	34.79
PGSC0003DMT400046505	Potato	plasma membrane	18.63	33.67
PGSC0003DMT400024123	Potato	plasma membrane	26.2	33.6
PGSC0003DMT400050981	Potato	cytosol	9.71	33.52
PGSC0003DMT400076092	Potato	cytosol	20.52	33.51
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	10.97	33.49
PGSC0003DMT400024057	Potato	vacuole	18.15	33.14
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	26.52	32.62
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	14.6	32.46
Os08t0542200-01	Rice	cytosol	12.39	32.3
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	16.02	32.07
PGSC0003DMT400054250	Potato	cytosol	14.13	31.68
HORVU7Hr1G000950.1	Barley	cytosol	13.58	31.68
PGSC0003DMT400043956	Potato	cytosol	24.7	31.62
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	24.23	31.42
PGSC0003DMT400008852	Potato	mitochondrion	9.23	31.37
HORVU7Hr1G002290.1	Barley	cytosol	16.1	31.24
PGSC0003DMT400043990	Potato	cytosol	9.23	31.03
PGSC0003DMT400079342	Potato	cytosol	17.68	30.98
TraesCS5B01G034600.1	Wheat	cytosol	11.05	30.91
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	24.15	30.75
PGSC0003DMT400017408	Potato	cytosol	26.76	30.51
PGSC0003DMT400079343	Potato	cytosol	15.31	30.5
PGSC0003DMT400017461	Potato	cytosol	27.94	30.46
TraesCS7D01G018700.1	Wheat	cytosol	16.97	30.28
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	17.68	30.23
PGSC0003DMT400008029	Potato	cytosol	28.1	30.22
PGSC0003DMT400006336	Potato	cytosol	13.02	30.05
PGSC0003DMT400012963	Potato	cytosol	26.99	30.03
TraesCS7D01G017600.1	Wheat	cytosol	18.15	29.79
TraesCS7D01G122800.1	Wheat	cytosol	16.89	29.76
HORVU7Hr1G000890.2	Barley	cytosol	20.84	29.43
PGSC0003DMT400051008	Potato	cytosol	7.42	29.38
TraesCS7D01G018200.1	Wheat	cytosol	19.65	29.16
TraesCS7D01G018400.1	Wheat	cytosol	7.34	28.97
TraesCS5B01G309200.1	Wheat	cytosol	10.02	28.86
TraesCS5B01G034500.1	Wheat	cytosol	10.42	28.76
TraesCS7D01G018500.1	Wheat	cytosol	12.63	28.57
TraesCS7D01G017900.1	Wheat	cytosol	8.37	28.42
TraesCS7D01G122900.1	Wheat	cytosol	23.6	28.18
PGSC0003DMT400024063	Potato	cytosol	11.84	28.04
TraesCS7B01G024800.1	Wheat	cytosol, plastid	8.84	27.86
OQU80806	Sorghum	cytosol	25.34	27.77
TraesCS7D01G122700.1	Wheat	cytosol	22.81	27.76
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	19.89	27.72
TraesCS7B01G024900.1	Wheat	cytosol	23.76	27.64
PGSC0003DMT400044170	Potato	cytosol	23.84	27.61
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	13.18	27.6
TraesCS7B01G024700.1	Wheat	cytosol	23.44	27.58
TraesCS7A01G535400.1	Wheat	plasma membrane	19.89	27.51
Os08t0543500-01	Rice	cytosol, plastid	25.02	27.49
HORVU7Hr1G026360.1	Barley	extracellular	23.44	27.45
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	16.02	27.36
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	9.31	27.25
TraesCS3B01G497800.1	Wheat	cytosol	20.76	27.2
TraesCS7B01G024600.1	Wheat	cytosol	13.18	27.07
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	25.34	27.04
EES14172	Sorghum	cytosol	25.34	26.95
HORVU7Hr1G002260.2	Barley	cytosol	22.1	26.95
Os08t0543050-00	Rice	cytosol, plastid	25.73	26.94
Os05t0380300-01	Rice	plasma membrane	26.76	26.93
OQU80781	Sorghum	cytosol, extracellular, nucleus	25.1	26.75
EES14143	Sorghum	cytosol	24.55	26.6
TraesCS7D01G017300.1	Wheat	plasma membrane	15.39	26.53
HORVU7Hr1G000760.3	Barley	cytosol	20.05	26.46
Os08t0543100-00	Rice	cytosol	24.7	26.44
TraesCS5D01G031100.1	Wheat	mitochondrion	16.18	26.42
TraesCS7D01G018000.1	Wheat	cytosol	23.76	26.11
TraesCS7D01G017700.1	Wheat	cytosol	23.68	26.06
TraesCS7D01G000900.1	Wheat	plasma membrane	22.73	26.06
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	19.97	26.0
TraesCS7D01G123000.1	Wheat	cytosol, plastid	23.6	25.87
TraesCS5D01G398100.1	Wheat	cytosol	24.55	25.79
Zm00001d031711_P001	Maize	cytosol	24.07	25.52
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	8.92	25.22
HORVU5Hr1G006710.5	Barley	cytosol	24.86	24.86
TraesCS7B01G339900.1	Wheat	plasma membrane	23.68	24.29
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	14.6	22.76
TraesCS7A01G535300.1	Wheat	cytosol	1.97	16.13

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M0ZZC6	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG401004423	PGSC:PGSC0003DMG401004423	EnsemblPlants:PGSC0003DMT400011301	PRINTS:PR00364
PANTHER:PTHR23155	PANTHER:PTHR23155:SF877	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000295F66D	SEG:seg	:	:	:	:

Description

Cc-nbs-lrr resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG401004423]

Coordinates

chr10:-:46024581..46030865

Molecular Weight (calculated)

145408.0 Da

IEP (calculated)

6.649

GRAVY (calculated)

-0.121

Length

1267 amino acids

Sequence
(BLAST)

0001: MSDPVIGATV QVLLQKLLSL TIEELSSSSD CKKDLEMLTQ NVSLIQAFIH DAERRQVDDQ AVKLWLKRLE KAAENAENVF DEFRYESIKR QVKIHKNPML
0101: KVSDFISHTT FKSKMSRKIN TINEELRDIN KLSKYLGLQS LMVPPRQILP IRETDSVVVA LDVVGRDNDV AEIKRMMLNI RDDVVLCTIP IVGMGGLGKT
0201: TMAKSIFNDE KIEKYFEKRV WLCLPEMLET KSFLQLILES LTKRKVEVQS RDIIVKMLQD ELAGRKYLLV LDDLWNVNST LWVEFVDTLR GMNTSRGNFI
0301: LVTTRMEQVA STVATVGPHR LEKLAKDHCW SIFKQRAFVD EQVPEEIVIM ENRIVEMCQG LPLAASVLGG LLRNKEKHEW QAILDGNPLV TGEDDNEENS
0401: VKKILKLSYD YLPSPHLKKC FAYFAMFPKD FEFDKDQLIQ LWMAEGFLHP CQETTVMEDI GNKFFQLLLR NSLLQNVKLD EHNNITHYKM HDLVHDLAGD
0501: ILKSKLSDPK GDGPEDLSQV RYFGWDSPSD QIVNINEPGR LCTLFWRINI SEDMLLSFKF LRVLNLSCSG IKELSAKIGK LIHLRYLDLS NTKIIALPNS
0601: ICELYNLQTF RVDRCYPLPY EMGNMISLRH IYCHSRSQSQ MPLNMGQLTC LQTLQYFNVG LEKGRRIEEL GRLKNLRGEL RINHLQLVRS REEARTTYLQ
0701: EKSNIYKLSY VWFRDEPEGC ETIDEHVLDG LQPHPNLKTL LVEDYLGTRF PSWFSEESLP NLVKLTLSGC KRCKEIPSLG QLKFLQHLKL IGLPELEFIG
0801: PTFCGVEVND NGSCSKIQVF PSLKVLLLEN MHSLTEWKGV ELIPTTSGVR MFPGLEKLRI SNCPVLKSTP NQFEILRELE IVEVDSEMPL LNLCSNLTSL
0901: VMLSVYDVKE LTCFPDEILR NNVSLQHLSV ADCREFHELP QSLYNLHFLK SLRINLCTNF SSFPVPTGEN YLTSLQSLQL ISCDGLTSLP RGMLEHCRSL
1001: ESLKVFNCNN LVSFPLHVGE KPSLSYLNIS KCPKLISVPA GGLRLTGLQH LEIGPFSEMV DFEAFQLIFD GIQSLHTLEV WGHLHWDSLP YQLMQLSDLI
1101: EIKIYGFGIK ALPHRFGNLT SLERLMLMGC KRLQHLDFSD AMPKLRYLCI NDCPLLEAIS DGLGNLVSLQ ELFLQKCEKL EHLPSRDAMR RLTKLWNLEI
1201: KGCPKLEESC TNWSGSNSQW SNISHILKIE VGGSIIQDLR KFLFLFLFLS CIFNYYFPRV ILLHSPL

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.