Factsheet for PGSC0003DMT400011307

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028879	Potato	extracellular	60.25	72.19
PGSC0003DMT400021607	Potato	cytosol	68.89	58.86
PGSC0003DMT400028871	Potato	cytosol	60.25	53.63
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	47.65	52.59
PGSC0003DMT400021294	Potato	cytosol	59.51	39.97
PGSC0003DMT400049255	Potato	cytosol	76.05	33.41
PGSC0003DMT400021631	Potato	cytosol	80.74	32.12
PGSC0003DMT400065971	Potato	cytosol	72.59	30.56
PGSC0003DMT400051007	Potato	cytosol	31.85	28.23
PGSC0003DMT400011301	Potato	cytosol	87.41	27.94
PGSC0003DMT400024060	Potato	cytosol	28.4	27.71
PGSC0003DMT400056053	Potato	cytosol	75.31	27.43
PGSC0003DMT400022156	Potato	cytosol	85.43	27.33
PGSC0003DMT400028843	Potato	cytosol	51.85	26.52
PGSC0003DMT400049984	Potato	cytosol	78.27	26.0
PGSC0003DMT400022154	Potato	cytosol	77.04	25.2
PGSC0003DMT400071966	Potato	nucleus	76.3	24.9
PGSC0003DMT400021634	Potato	cytosol	78.02	24.82
PGSC0003DMT400028691	Potato	cytosol	78.27	24.57
HORVU7Hr1G000950.1	Barley	cytosol	30.62	22.84
PGSC0003DMT400028851	Potato	cytosol	22.72	22.28
PGSC0003DMT400024063	Potato	cytosol	29.38	22.24
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	20.99	20.48
HORVU7Hr1G002290.1	Barley	cytosol	32.84	20.37
PGSC0003DMT400024057	Potato	vacuole	33.83	19.74
TraesCS7D01G018700.1	Wheat	cytosol	32.84	18.73
TraesCS7D01G122800.1	Wheat	cytosol	32.84	18.5
PGSC0003DMT400076092	Potato	cytosol	34.81	18.17
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	33.09	18.08
PGSC0003DMT400046505	Potato	plasma membrane	30.62	17.69
TraesCS7D01G017600.1	Wheat	cytosol	33.58	17.62
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	26.91	17.22
Os08t0542200-01	Rice	cytosol	20.49	17.08
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	31.11	16.98
TraesCS5B01G034600.1	Wheat	cytosol	18.77	16.78
TraesCS7D01G018200.1	Wheat	cytosol	33.58	15.93
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	48.64	15.71
TraesCS7D01G018500.1	Wheat	cytosol	21.48	15.54
TraesCS7A01G535400.1	Wheat	plasma membrane	34.57	15.28
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	22.72	15.21
PGSC0003DMT400050981	Potato	cytosol	13.33	14.71
HORVU7Hr1G000890.2	Barley	cytosol	32.35	14.6
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	20.49	14.56
PGSC0003DMT400054250	Potato	cytosol	20.0	14.34
TraesCS7B01G024600.1	Wheat	cytosol	21.73	14.26
PGSC0003DMT400024123	Potato	plasma membrane	34.07	13.97
TraesCS3B01G497800.1	Wheat	cytosol	33.09	13.86
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	34.57	13.59
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	32.59	13.51
HORVU7Hr1G002260.2	Barley	cytosol	34.32	13.38
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	29.88	13.31
PGSC0003DMT400006336	Potato	cytosol	18.02	13.3
HORVU7Hr1G000760.3	Barley	cytosol	31.36	13.23
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	32.35	13.17
PGSC0003DMT400043956	Potato	cytosol	32.1	13.13
TraesCS7D01G122900.1	Wheat	cytosol	33.83	12.91
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	30.86	12.85
PGSC0003DMT400028882	Potato	cytosol	8.89	12.77
TraesCS5B01G034500.1	Wheat	cytosol	14.32	12.64
PGSC0003DMT400017408	Potato	cytosol	34.57	12.6
TraesCS5B01G309200.1	Wheat	cytosol	13.58	12.5
TraesCS7D01G122700.1	Wheat	cytosol	32.1	12.49
HORVU7Hr1G026360.1	Barley	extracellular	33.33	12.48
TraesCS7B01G024700.1	Wheat	cytosol	33.09	12.44
TraesCS7D01G017300.1	Wheat	plasma membrane	22.22	12.24
TraesCS5D01G031100.1	Wheat	mitochondrion	23.46	12.24
PGSC0003DMT400008029	Potato	cytosol	35.56	12.22
PGSC0003DMT400012963	Potato	cytosol	34.32	12.2
TraesCS7D01G123000.1	Wheat	cytosol, plastid	34.57	12.11
TraesCS7B01G024900.1	Wheat	cytosol	32.1	11.94
PGSC0003DMT400017461	Potato	cytosol	33.83	11.79
PGSC0003DMT400044170	Potato	cytosol	31.6	11.7
TraesCS7D01G017700.1	Wheat	cytosol	33.09	11.64
PGSC0003DMT400079343	Potato	cytosol	18.27	11.64
Os08t0543500-01	Rice	cytosol, plastid	33.09	11.62
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	33.83	11.54
OQU80806	Sorghum	cytosol	32.84	11.51
Os08t0543100-00	Rice	cytosol	33.58	11.49
TraesCS7D01G018000.1	Wheat	cytosol	32.59	11.45
Os08t0543050-00	Rice	cytosol, plastid	34.07	11.4
TraesCS7D01G000900.1	Wheat	plasma membrane	31.11	11.4
EES14143	Sorghum	cytosol	32.1	11.12
Zm00001d031711_P001	Maize	cytosol	32.35	10.96
OQU80781	Sorghum	cytosol, extracellular, nucleus	32.1	10.93
Os05t0380300-01	Rice	plasma membrane	33.83	10.88
EES14172	Sorghum	cytosol	31.85	10.83
TraesCS5D01G398100.1	Wheat	cytosol	31.6	10.61
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	21.23	10.58
TraesCS7B01G339900.1	Wheat	plasma membrane	31.6	10.36
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	11.36	10.27
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	10.86	10.16
HORVU5Hr1G006710.5	Barley	cytosol	31.6	10.1
TraesCS7B01G024800.1	Wheat	cytosol, plastid	9.63	9.7
PGSC0003DMT400079342	Potato	cytosol	16.79	9.41
TraesCS7D01G018400.1	Wheat	cytosol	6.91	8.72
TraesCS7D01G017900.1	Wheat	cytosol	6.17	6.7
PGSC0003DMT400008852	Potato	mitochondrion	5.68	6.17
PGSC0003DMT400043990	Potato	cytosol	5.68	6.1
PGSC0003DMT400051008	Potato	cytosol	2.96	3.75
TraesCS7A01G535300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:102591772	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M0ZZD2	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG402004425
PGSC:PGSC0003DMG402004425	EnsemblPlants:PGSC0003DMT400011307	PANTHER:PTHR23155	PANTHER:PTHR23155:SF877	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI0002950F31	RefSeq:XP_015160140.1	RefSeq:XP_015160141.1	RefSeq:XP_015160142.1	:	:

Description

Cc-nbs-lrr resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG402004425]

Coordinates

chr10:+:46099444..46102959

Molecular Weight (calculated)

46666.9 Da

IEP (calculated)

7.748

GRAVY (calculated)

-0.233

Length

405 amino acids

Sequence
(BLAST)

001: MITSRGNFIL VTTRMEQVAS TVATVGPHRL EKLAKDHCWS IFKQRAFVDG EVPEEIVIME NRIVEMCQGL PLAASVLGGL LRNKQKHEWQ AILDGNPLVA
101: SEDDNGENNI KKILKLSYDY LPSPHLKKCF AYFAMFPKDF EFEKDQLIQL WMAEGILHPC QEITVMEDIG YKFFQLLLRN SLLQDVKLDK HNNITHCKMH
201: DLVHGLAGDI IKSKLFDPRS DGGENLSQER YFGWDSPSDQ IDKIKEPECL CTLFWRSNYI SEDMLLSFKF LRVLNLSSSG IKELSAKIGK LIHLRYLDLS
301: DTKITALPHS ICELYNLQTF RFYKFGSLLA LPYEMGNMIS LRHIYFCSRS QTPLNMGQLT CLQTLQYFNV GLEKGRRIEE LGHLKNLRGK LRINGLQLVR
401: NREEA

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.