Factsheet for PGSC0003DMT400056053

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 4
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	25.99	78.75
PGSC0003DMT400028879	Potato	extracellular	23.11	76.04
PGSC0003DMT400011307	Potato	cytosol	27.43	75.31
PGSC0003DMT400021294	Potato	cytosol	40.74	75.12
PGSC0003DMT400021607	Potato	cytosol	31.92	74.89
PGSC0003DMT400065971	Potato	cytosol	62.95	72.77
PGSC0003DMT400028843	Potato	cytosol	51.44	72.22
PGSC0003DMT400022154	Potato	cytosol	75.0	67.37
PGSC0003DMT400022156	Potato	cytosol	75.99	66.75
PGSC0003DMT400021631	Potato	cytosol	60.88	66.5
PGSC0003DMT400071966	Potato	nucleus	73.56	65.91
PGSC0003DMT400049984	Potato	cytosol	71.67	65.38
PGSC0003DMT400011301	Potato	cytosol	73.92	64.88
PGSC0003DMT400028691	Potato	cytosol	75.09	64.73
PGSC0003DMT400049255	Potato	cytosol	53.06	63.99
PGSC0003DMT400021634	Potato	cytosol	73.11	63.86
PGSC0003DMT400028871	Potato	cytosol	25.54	62.42
PGSC0003DMT400028882	Potato	cytosol	14.75	58.16
PGSC0003DMT400028851	Potato	cytosol	20.05	54.0
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	42.63	37.8
PGSC0003DMT400024060	Potato	cytosol	13.31	35.66
PGSC0003DMT400051007	Potato	cytosol	13.85	33.7
PGSC0003DMT400076092	Potato	cytosol	23.11	33.12
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	12.23	32.77
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	16.1	31.4
HORVU7Hr1G002290.1	Barley	cytosol	18.35	31.24
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	17.63	30.96
PGSC0003DMT400046505	Potato	plasma membrane	19.42	30.81
HORVU7Hr1G000950.1	Barley	cytosol	15.02	30.76
PGSC0003DMT400050981	Potato	cytosol	10.07	30.52
PGSC0003DMT400006336	Potato	cytosol	14.93	30.24
PGSC0003DMT400008852	Potato	mitochondrion	10.07	30.03
PGSC0003DMT400054250	Potato	cytosol	15.2	29.91
PGSC0003DMT400024123	Potato	plasma membrane	25.81	29.05
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	19.33	29.01
PGSC0003DMT400043990	Potato	cytosol	9.8	28.91
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	26.62	28.74
PGSC0003DMT400024057	Potato	vacuole	17.81	28.53
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	24.28	27.64
PGSC0003DMT400008029	Potato	cytosol	29.23	27.59
PGSC0003DMT400043956	Potato	cytosol	24.37	27.37
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	24.19	27.04
Os08t0542200-01	Rice	cytosol	11.78	26.95
PGSC0003DMT400079342	Potato	cytosol	17.45	26.83
PGSC0003DMT400017408	Potato	cytosol	26.62	26.64
TraesCS5B01G034600.1	Wheat	cytosol	10.79	26.49
TraesCS7D01G018200.1	Wheat	cytosol	20.32	26.46
PGSC0003DMT400017461	Potato	cytosol	27.61	26.42
TraesCS5D01G031100.1	Wheat	mitochondrion	18.44	26.42
HORVU7Hr1G000890.2	Barley	cytosol	20.86	25.86
HORVU7Hr1G002260.2	Barley	cytosol	24.1	25.79
PGSC0003DMT400079343	Potato	cytosol	14.75	25.79
TraesCS7D01G017600.1	Wheat	cytosol	17.81	25.65
PGSC0003DMT400012963	Potato	cytosol	26.17	25.55
TraesCS7D01G122800.1	Wheat	cytosol	16.46	25.45
PGSC0003DMT400024063	Potato	cytosol	12.23	25.42
TraesCS7D01G018700.1	Wheat	cytosol	16.19	25.35
TraesCS7D01G122700.1	Wheat	cytosol	23.2	24.78
TraesCS7D01G122900.1	Wheat	cytosol	23.47	24.6
HORVU7Hr1G026360.1	Barley	extracellular	23.83	24.49
HORVU7Hr1G000760.3	Barley	cytosol	21.13	24.48
TraesCS7B01G024700.1	Wheat	cytosol	23.65	24.42
TraesCS7A01G535400.1	Wheat	plasma membrane	20.05	24.34
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	21.22	24.25
TraesCS7B01G024900.1	Wheat	cytosol	23.65	24.15
Os05t0380300-01	Rice	plasma membrane	27.25	24.07
OQU80806	Sorghum	cytosol	25.0	24.05
OQU80781	Sorghum	cytosol, extracellular, nucleus	25.54	23.89
TraesCS7D01G000900.1	Wheat	plasma membrane	23.65	23.8
Os08t0543500-01	Rice	cytosol, plastid	24.64	23.76
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	19.42	23.76
EES14172	Sorghum	cytosol	25.45	23.76
TraesCS3B01G497800.1	Wheat	cytosol	20.59	23.68
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	25.18	23.59
PGSC0003DMT400044170	Potato	cytosol	23.2	23.58
Os08t0543050-00	Rice	cytosol, plastid	25.63	23.55
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	15.65	23.45
TraesCS7D01G018500.1	Wheat	cytosol	11.69	23.21
EES14143	Sorghum	cytosol	24.37	23.18
TraesCS7D01G123000.1	Wheat	cytosol, plastid	24.01	23.1
Zm00001d031711_P001	Maize	cytosol	24.64	22.93
TraesCS7D01G018000.1	Wheat	cytosol	23.74	22.9
Os08t0543100-00	Rice	cytosol	24.37	22.89
TraesCS7D01G017700.1	Wheat	cytosol	23.38	22.59
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	16.46	22.51
HORVU5Hr1G006710.5	Barley	cytosol	25.45	22.34
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	11.96	21.98
TraesCS5D01G398100.1	Wheat	cytosol	23.74	21.89
TraesCS5B01G034500.1	Wheat	cytosol	8.99	21.79
TraesCS7B01G024600.1	Wheat	cytosol	11.96	21.56
TraesCS5B01G309200.1	Wheat	cytosol	8.45	21.36
TraesCS7D01G017300.1	Wheat	plasma membrane	13.94	21.09
TraesCS7B01G339900.1	Wheat	plasma membrane	23.29	20.97
PGSC0003DMT400051008	Potato	cytosol	5.94	20.62
TraesCS7D01G018400.1	Wheat	cytosol	5.94	20.56
TraesCS7B01G024800.1	Wheat	cytosol, plastid	7.37	20.4
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	7.55	19.4
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	7.28	18.08
TraesCS7D01G017900.1	Wheat	cytosol	6.03	17.96
TraesCS7A01G535300.1	Wheat	cytosol	2.34	16.77

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
UniProt:M1BYW4	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400021779	PGSC:PGSC0003DMG400021779
EnsemblPlants:PGSC0003DMT400056053	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF877	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000295B78F	SEG:seg	:	:	:	:

Description

Cc-nbs-lrr resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021779]

Coordinates

chr5:+:18338665..18342003

Molecular Weight (calculated)

127344.0 Da

IEP (calculated)

6.257

GRAVY (calculated)

-0.080

Length

1112 amino acids

Sequence
(BLAST)

0001: MAINKLAKHL GIQSLIVPSP QILQIRETDS LVIISDVVGR DKDVSDIKEK ILNMREDVVL CTIPIVGMGG LGKTTVAKRI FNDEQIEKHF EKRVWLCLPE
0101: MSEMKSFLEL ILESLTERKL EVQSRDIIVK KLRDELTGRK YLLVLDDLWR VDPTLWHEFV DTLRGINTSR GNCILVTTRM ELVASAVAVG PHMLEKLTEH
0201: HCWSIFKQKA FVDGEVPEGI MSMEKRIGEM CQGLPLAASV LGGLLRNKKK HEWKAILDGN PLVPLDQDDN GENSLKKILK LSFNYLPSPH LKKCFAYFAM
0301: FPKDFEFEKD QLIQLWMAEG YLCPFQDAVL MEDVGNKFFQ LLLQYSLLQD VKLDEHSNIT HCKMHDLVHD LAGDILKSKL FDQKGVKGEN LSQVRYFGWD
0401: SPRDQIDKIN EPGRLYTLFW RCNSVPEDVL LSFKFLRVLN LSKSGMWELT ASVGKLIHLR YLDLSDTNIK ALPDSICKLY NLQTLRVNNC YYLEELPDEM
0501: GNMISLRHIY CTPLHNKHFR MPFNMGKLTC LQTLQYFEVG IEQGRQLVEL GHLENLRGEL TIRGLQLVVN KEEAQTTYLQ EKPNIYKLAY LWSHDEPEGC
0601: ETNDEHVLDG LQPHPNLKTL EVEEYLGTRF PSWFSEKFLP NLVKLKLIDC KRCTKIPLLG QLKFLRHLEL VGFHKVECIG TTFYAIDGNN NGNIQVFPSL
0701: KELVLEDMPS LIEWKGVELI PTTNGGRDEV IGVRMFPGLE KLRITKCPLL KSTPNQFEIL RELIIEGVDS GMPLLNLCSN LTSLVKLDLS DVKELTCLPD
0801: EILRNNVSLQ FLSVSDCGEF REFPQSLYNL HSLKSLEISF CTNFSSFPVP SGENYLTSLQ SLQLFCCDEL TILPSGMVEH CRSLETLLVS YCNNLVSFPL
0901: HVWEMPSLSD LDISECPKLI SVPAGGLHRL TGLRALCIGP FSEMVDFEAF QLIFNGIQQL LSFRRLYVYG RLHWDSLPYQ LMQLSFLTHI RIYDFGIKAI
1001: PHTLGNLTSL ETLELRSCKR LQHVDLLHVM PKLRYLWIDD CPLLEALMDG IVNLISLEVL TLSKCEKLKH LPSRDVMQRL TKLWSLQIEG CPQLKESCTK
1101: LSVVQDFSSS SN

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.