Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 5
- endoplasmic reticulum 4
- plasma membrane 4
- extracellular 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 18.18 | 43.75 |
| GSMUA_Achr11P... | Banana | cytosol | 12.99 | 29.41 |
| GSMUA_Achr11P... | Banana | cytosol | 12.55 | 29.29 |
| GSMUA_Achr3P18480_001 | Banana | cytosol, unclear | 19.05 | 21.26 |
Protein Annotations
| Gene3D:3.10.450.650 | MapMan:35.2 | InterPro:Cystatin | InterPro:Cystatin_dom | GO:GO:0003674 | GO:GO:0004869 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010466 | GO:GO:0010951 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0030414 | EnsemblPlantsGene:GSMUA_AchrUn_randomG09410_001 | EnsemblPlants:GSMUA_AchrUn_randomP09410_001 | EnsemblPlants:GSMUA_AchrUn_randomT09410_001 | UniProt:M0U7Q1 |
| PFAM:PD001231 | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF56 | SUPFAM:SSF54403 | TMHMM:TMhelix | UniParc:UPI000296DFB3 |
| SEG:seg | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09410_001]
Coordinates
chrchrUn_random:+:44641297..44645690
Molecular Weight (calculated)
27196.7 Da
IEP (calculated)
10.602
GRAVY (calculated)
-0.439
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEKHEKRI FRSELMILFF FFLLANSPFK TLNFSFFVWD KSFESLLSFG YEIESHEDRF YNGDDSSPRS HNSRLLALFL RLHHLRSRWR SSEGSGKWKG
101: LLTAPRSSSS PALPSTNVTR KRLLSWSSWC AWSRRRSGWL QGALHQLTVE AVDAGKKKVD EAKVWVKPWL NFKELQEFRH AADSGLRIMV LGKVRRCCET
201: TCCLRVGIYH MSSKYYDVCK TTSRHFFMYR R
101: LLTAPRSSSS PALPSTNVTR KRLLSWSSWC AWSRRRSGWL QGALHQLTVE AVDAGKKKVD EAKVWVKPWL NFKELQEFRH AADSGLRIMV LGKVRRCCET
201: TCCLRVGIYH MSSKYYDVCK TTSRHFFMYR R
001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
Arabidopsis Description
CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.