Factsheet for HORVU1Hr1G000840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G002540.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	98.86	27.97
TraesCS7B01G453200.1	Wheat	cytosol, plastid	69.32	14.66
HORVU7Hr1G117670.1	Barley	cytosol	47.73	13.21
TraesCS7D01G522300.1	Wheat	plasma membrane	71.59	12.07
HORVU3Hr1G113690.11	Barley	mitochondrion	70.45	7.96
HORVU3Hr1G113800.1	Barley	cytosol	71.59	6.34
HORVU1Hr1G002440.2	Barley	plastid	98.86	5.98
HORVU1Hr1G000900.5	Barley	cytosol	81.82	5.14
HORVU1Hr1G000830.1	Barley	cytosol	81.82	5.03
HORVU1Hr1G000860.4	Barley	cytosol	82.95	4.93
HORVU3Hr1G113640.2	Barley	cytosol	70.45	4.88
HORVU7Hr1G117570.5	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.5	4.17
HORVU5Hr1G017940.1	Barley	cytosol, plasma membrane	54.55	3.59
HORVU5Hr1G017950.2	Barley	cytosol, plasma membrane	54.55	3.59
HORVU7Hr1G026360.1	Barley	extracellular	34.09	2.77
HORVU5Hr1G006710.5	Barley	cytosol	29.55	2.05
HORVU7Hr1G000890.2	Barley	cytosol	12.5	1.23
HORVU1Hr1G001460.7	Barley	cytosol	14.77	1.02
HORVU7Hr1G000760.3	Barley	cytosol	7.95	0.73
HORVU7Hr1G000950.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G002260.2	Barley	cytosol	0.0	0.0
HORVU7Hr1G002290.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G117680.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G117690.6	Barley	cytosol	0.0	0.0
PGSC0003DMT400028871	Potato	cytosol	0.0	0.0
HORVU1Hr1G000910.9	Barley	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G000840.1	EnsemblPlantsGene:HORVU1Hr1G000840	PANTHER:PTHR23155	PANTHER:PTHR23155:SF865	UniParc:UPI000B477F73	UniProt:A0A287EFA3
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:2256321..2260574

Molecular Weight (calculated)

9968.1 Da

IEP (calculated)

4.651

GRAVY (calculated)

-0.197

Length

88 amino acids

Sequence
(BLAST)

1: MAELVAAMAI RPLVSMLMSK ASNSLLDQYK VMEGMEEQHK ILKRKLPAIL DVMTDAEEQA TEHRDGAKAW LQELKAVAYQ ANEVFDEF

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.