Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0015g00410.t01 Wine grape cytosol 18.28 20.73
HORVU1Hr1G017740.5 Barley cytosol 30.11 10.89
HORVU6Hr1G048410.6 Barley cytosol 49.46 4.75
HORVU3Hr1G073020.2 Barley cytosol 46.24 4.45
CDX77888 Canola endoplasmic reticulum, golgi 12.9 4.43
HORVU5Hr1G055350.3 Barley cytosol 46.24 4.42
HORVU3Hr1G029200.1 Barley plastid 43.01 3.99
HORVU3Hr1G000940.2 Barley cytosol 26.88 2.39
Bra038400.1-P Field mustard cytosol 1.08 1.69
HORVU7Hr1G080510.4 Barley cytosol 10.75 1.27
KRH71124 Soybean cytosol 9.68 1.16
AT3G42628.1 Thale cress cytosol 0.0 0.0
CDY53032 Canola golgi, mitochondrion 0.0 0.0
Zm00001d037294_P001 Maize cytosol 0.0 0.0
Protein Annotations
KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31MapMan:35.1UniProt:A0A287F372
GO:GO:0003674GO:GO:0003824GO:GO:0006091GO:GO:0006099GO:GO:0008150GO:GO:0008152
GO:GO:0008964GO:GO:0009987GO:GO:0015977EnsemblPlantsGene:HORVU1Hr1G032600EnsemblPlants:HORVU1Hr1G032600.1InterPro:PEP_COase
PFAM:PF00311PANTHER:PTHR30523PANTHER:PTHR30523:SF10InterPro:Pyrv/PenolPyrv_Kinase-like_domSUPFAM:SSF51621UniParc:UPI000B46A74F
Description
No Description!
Coordinates
chrchr1H:-:201371905..201373430
Molecular Weight (calculated)
10966.2 Da
IEP (calculated)
10.323
GRAVY (calculated)
-0.604
Length
93 amino acids
Sequence
(BLAST)
1: MYKAQEKLIM FAKHYRVKVD NFSWKRWNGW QRRSPSHLAI LSQPQDTIHG LLRVTFQSKD KEHSLGEEHL CFGTLQRFTA VTLEHGVLSC RNP
Best Arabidopsis Sequence Match ( AT2G42600.1 )
(BLAST)
001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG
Arabidopsis Description
PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.