CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g00410.t01	Wine grape	cytosol	18.08	59.76
HORVU1Hr1G032600.1	Barley	cytosol, mitochondrion	4.43	12.9
CDX75798	Canola	cytosol	33.21	12.64
CDX98516	Canola	cytosol	33.21	9.65
CDY02513	Canola	cytosol	33.58	9.44
CDY51508	Canola	cytosol	31.73	8.92
CDY14847	Canola	cytosol	31.73	8.92
CDY47982	Canola	cytosol	31.73	8.85
CDY55389	Canola	cytosol	31.73	8.82
CDY45929	Canola	cytosol	25.83	8.35
CDY25721	Canola	cytosol	26.94	8.19
CDY28081	Canola	cytosol	14.39	7.85
CDY32330	Canola	cytosol	4.43	5.8
CDY32329	Canola	cytosol	5.54	4.82
CDY04256	Canola	cytosol	18.45	4.82
CDY07365	Canola	cytosol	18.08	4.72
CDX85005	Canola	cytosol	17.71	4.55
CDY16140	Canola	plastid	17.71	4.22
CDX82457	Canola	cytosol	10.7	3.75
CDX97618	Canola	cytosol	10.7	3.74
KRH71124	Soybean	cytosol	5.9	2.05
CDY53032	Canola	golgi, mitochondrion	0.37	1.41
AT3G42628.1	Thale cress	cytosol	0.0	0.0
CDY32328	Canola	cytosol	0.0	0.0
Zm00001d037294_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	MapMan:35.1	GO:A0A078CRU0
EnsemblPlants:CDX77888	ProteinID:CDX77888	ProteinID:CDX77888.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091
GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009987	GO:GO:0015977
EnsemblPlantsGene:GSBRNA2T00129101001	InterPro:PEP_COase	PFAM:PF00311	PRINTS:PR00150	PANTHER:PTHR30523	PANTHER:PTHR30523:SF23
MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI0004EF1528
SEG:seg	:	:	:	:	:

Description

BnaC03g53310D

Coordinates

chrLK031813:-:1619214..1625612

Molecular Weight (calculated)

30514.7 Da

IEP (calculated)

9.177

GRAVY (calculated)

-0.107

Length

271 amino acids

Sequence
(BLAST)

001: MRDSTLVILL LSLEYMDKGV HFVVWHCWKH KPLMWQLVSA SVFDAYYNQK KFSHYSSLPV YNYVFYISTT RTVIVYLSLW DEAASTFRGL LNSGEKSQSV
101: VVVNTVYPKI FGDFCREPLS HLHTSYQILF DTDLPVVKEF TTKTEVFPCV DTMEGIKKKD LNTFISNSNE HRKLIFSVKL GFLVSSNKMD SLLSHTTDAT
201: GNSGKDAGRL SAAWELYKAQ EELVKVTKQY GVKLTMFHGR GGVVGRGGGP THLAILSQPP DPVNGSPRVT V

Best Arabidopsis Sequence Match ( AT3G14940.1 )
(BLAST)

001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG

Arabidopsis Description

PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.