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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97618 Canola cytosol 82.74 99.48
CDX82457 Canola cytosol 81.03 97.67
CDX75798 Canola cytosol 74.17 97.19
AT3G14940.1 Thale cress cytosol 96.89 93.39
CDY32328 Canola cytosol 4.18 92.86
CDY32329 Canola cytosol 30.44 91.32
CDY02513 Canola cytosol 90.57 87.66
CDY25721 Canola cytosol 83.6 87.54
CDY45929 Canola cytosol 78.24 87.11
VIT_12s0028g02180.t01 Wine grape cytosol 88.96 86.01
VIT_19s0014g01390.t01 Wine grape cytosol 88.53 85.77
Solyc10g007290.2.1 Tomato cytosol, plastid 87.14 84.34
GSMUA_Achr4P08030_001 Banana cytosol 84.57 84.29
PGSC0003DMT400039809 Potato cytosol 87.03 84.15
GSMUA_Achr6P26850_001 Banana cytosol 84.67 84.04
PGSC0003DMT400054791 Potato cytosol 86.82 84.02
Os01t0758300-01 Rice cytosol, plasma membrane 83.07 83.87
KRH27044 Soybean nucleus 86.82 83.85
EES13699 Sorghum cytosol 86.6 83.82
Solyc12g014250.1.1 Tomato cytosol, nucleus, plastid, unclear 86.6 83.73
KRH55092 Soybean nucleus 86.71 83.66
KRH55745 Soybean cytosol, endoplasmic reticulum, nucleus 86.6 83.64
KRH26228 Soybean nucleus 86.39 83.35
PGSC0003DMT400052608 Potato cytosol 85.42 83.28
Solyc07g055060.2.1 Tomato nucleus 85.96 83.19
Os08t0366000-01 Rice cytosol, plasma membrane 85.53 82.78
EER98700 Sorghum cytosol 85.64 82.63
PGSC0003DMT400032245 Potato cytosol 85.32 82.57
KRH27345 Soybean endoplasmic reticulum 85.21 82.21
KRH21974 Soybean cytosol 85.21 82.21
KRH22285 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 86.07 82.11
HORVU5Hr1G055350.3 Barley cytosol 84.89 81.48
Solyc07g062530.2.1 Tomato cytosol, nucleus, plastid 84.14 81.43
Zm00001d020057_P004 Maize cytosol, extracellular 85.21 81.29
TraesCS5D01G186200.1 Wheat cytosol 84.67 81.28
TraesCS5B01G179800.1 Wheat cytosol, extracellular, golgi, unclear 84.67 81.28
TraesCS5A01G181800.1 Wheat cytosol, golgi 84.67 81.28
TraesCS3B01G329800.1 Wheat cytosol, golgi 83.92 81.06
CDY14847 Canola cytosol 83.6 80.91
HORVU3Hr1G073020.2 Barley cytosol 83.6 80.75
CDY51508 Canola cytosol 83.39 80.71
KXG33409 Sorghum cytosol 83.49 80.64
TraesCS3D01G295200.1 Wheat cytosol 83.49 80.64
TraesCS3A01G306700.1 Wheat cytosol 83.49 80.64
Zm00001d012702_P008 Maize cytosol 83.39 80.54
GSMUA_Achr6P14490_001 Banana cytosol 80.81 80.3
GSMUA_Achr10P... Banana cytosol 80.28 79.77
CDY47982 Canola cytosol 82.96 79.63
CDY55389 Canola cytosol 83.07 79.49
GSMUA_Achr9P06420_001 Banana cytosol 80.81 77.81
CDY32330 Canola cytosol 17.15 77.29
CDY53032 Canola golgi, mitochondrion 3.64 47.89
CDX77888 Canola endoplasmic reticulum, golgi 9.65 33.21
CDY04256 Canola cytosol 34.3 30.83
CDY07365 Canola cytosol 34.19 30.73
CDX85005 Canola cytosol 34.41 30.46
CDY16140 Canola plastid 34.62 28.41
CDY28081 Canola cytosol 12.33 23.14
Protein Annotations
KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31Gene3D:1.20.1440.90MapMan:1.4.1.1
GO:A0A078EBI9EnsemblPlants:CDX98516ProteinID:CDX98516ProteinID:CDX98516.1GO:GO:0003674GO:GO:0003824
GO:GO:0006091GO:GO:0006099GO:GO:0008150GO:GO:0008152GO:GO:0008964GO:GO:0009987
GO:GO:0015977EnsemblPlantsGene:GSBRNA2T00106160001HAMAP:MF_00595InterPro:PEPCASE_His_ASInterPro:PEP_COaseInterPro:PEP_COase_Lys_AS
InterPro:PEP_COase_bac/pln-typePFAM:PF00311PRINTS:PR00150ScanProsite:PS00393ScanProsite:PS00781PANTHER:PTHR30523
PANTHER:PTHR30523:SF11MetaCyc:PWY-1622MetaCyc:PWY-241MetaCyc:PWY-5913MetaCyc:PWY-6142MetaCyc:PWY-6146
MetaCyc:PWY-6549MetaCyc:PWY-7115MetaCyc:PWY-7117MetaCyc:PWY-7124InterPro:Pyrv/PenolPyrv_Kinase-like_domSUPFAM:SSF51621
UniParc:UPI0004EDB40FSEG:seg::::
Description
BnaC05g38590D
Coordinates
chrLK031905:+:707512..711944
Molecular Weight (calculated)
106607.0 Da
IEP (calculated)
6.160
GRAVY (calculated)
-0.414
Length
933 amino acids
Sequence
(BLAST)
001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL IEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK PNLAEEVQIA YRRRIKKLKK GDFADESSAT
101: TESDIEETFK RLVSVLGKSP EEIFDALKNQ TVDLVLTAHP TQSVRRSLLQ KHGRIRDCLA QLYAKDITPD DKQELDESLQ REIQAAFRTD EIRRTPPTPQ
201: DEMRAGMSYF HETIWNGVPK FLRRVDTALK NIGIDERVPY NAPLIQFSSW MGGDRDGNPR VTPEVTRDVC LLARMMAANF YYNQIENLMF ELSMWRCTDE
301: FRAKADEIHR NSRKDAAKHY IEFWKTIPPT EPYRVILGDV RDKLYHTRER SRQLLSNGIS DIPAEATFTN VEEFLEPLEL CYRSLCACGD RPIADGSLLD
401: FLRQVSTFGL SLVKLDIRQE SERHTDVLDA ITKHLDGSSY RDWSEERRQE WLLAELSGKR PLFGPDLPKT EEIADVLDTF KVISELPSDC FGAYIISMAT
501: SPSDVLAVEL LQRECHVKKP LRVVPLFEKL ADLEAAPAAV ARLFSLDWYK NRINGKQEVM IGYSDSGKDA GRLSAAWELY KAQEELVKVA KKYGVKLTMF
601: HGRGGTVGRG GGPTHLAILS QPPDTVNGSL RVTVQGEVIE QSFGEEHLCF RTLQRFTAAT LEHGMNPPVS PKPEWRALLD AMAVVATEEY RSVVFQEPRF
701: VEYFRLATPE LEYGRMNIGS RPSKRKPSGG IESLRAIPWI FAWTQTRFHL PVWLGFGAAF RYAIKKDVRN LHMLQDMYKH WPFFRVTIDL IEMVFAKGDP
801: GIAALYDKLL VSEDLWAFGE KLRTNFEETK SLVLQTAGHR DLLEEDPYLK QRLRLRDSYI TTLNVCQAYT LKRIRDQNYN VTLRPHISKE IMQSSKSAQE
901: LVKLNPTSEY APGLEDTLIL TMKGIAAGLQ NTG
Best Arabidopsis Sequence Match ( AT3G14940.2 )
(BLAST)
001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG
Arabidopsis Description
PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.