CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25721	Canola	cytosol	98.69	92.82
CDY32330	Canola	cytosol	22.43	90.82
CDY02513	Canola	cytosol	98.57	85.68
AT1G53310.3	Thale cress	cytosol	95.82	83.04
CDX82457	Canola	cytosol	74.34	80.49
CDX97618	Canola	cytosol	74.46	80.41
CDX98516	Canola	cytosol	87.11	78.24
CDY32328	Canola	cytosol	3.82	76.19
VIT_19s0014g01390.t01	Wine grape	cytosol	86.52	75.29
PGSC0003DMT400039809	Potato	cytosol	86.4	75.03
GSMUA_Achr6P26850_001	Banana	cytosol	84.13	75.0
GSMUA_Achr4P08030_001	Banana	cytosol	83.65	74.89
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	86.04	74.72
PGSC0003DMT400054791	Potato	cytosol	85.92	74.69
KRH27044	Soybean	nucleus	86.04	74.64
VIT_12s0028g02180.t01	Wine grape	cytosol	85.92	74.61
PGSC0003DMT400052608	Potato	cytosol	85.2	74.61
Solyc10g007290.2.1	Tomato	cytosol, plastid	85.8	74.59
EES13699	Sorghum	cytosol	85.68	74.48
Solyc07g055060.2.1	Tomato	nucleus	85.56	74.38
KRH55745	Soybean	cytosol, endoplasmic reticulum, nucleus	85.68	74.33
Os08t0366000-01	Rice	cytosol, plasma membrane	85.44	74.27
KRH55092	Soybean	nucleus	85.44	74.04
CDX75798	Canola	cytosol	62.89	74.02
KRH26228	Soybean	nucleus	85.2	73.84
EER98700	Sorghum	cytosol	84.61	73.32
KRH22285	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	85.44	73.21
KRH27345	Soybean	endoplasmic reticulum	83.77	72.6
KRH21974	Soybean	cytosol	83.65	72.49
Zm00001d020057_P004	Maize	cytosol, extracellular	84.49	72.39
PGSC0003DMT400032245	Potato	cytosol	83.05	72.2
CDY51508	Canola	cytosol	82.94	72.1
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	83.53	72.02
HORVU5Hr1G055350.3	Barley	cytosol	83.53	72.02
TraesCS5A01G181800.1	Wheat	cytosol, golgi	83.53	72.02
TraesCS5D01G186200.1	Wheat	cytosol	83.29	71.81
KXG33409	Sorghum	cytosol	82.7	71.74
CDY14847	Canola	cytosol	82.46	71.68
Os01t0758300-01	Rice	cytosol, plasma membrane	79.0	71.64
Zm00001d012702_P008	Maize	cytosol	82.46	71.53
Solyc07g062530.2.1	Tomato	cytosol, nucleus, plastid	81.74	71.06
GSMUA_Achr6P14490_001	Banana	cytosol	79.59	71.03
GSMUA_Achr10P...	Banana	cytosol	79.36	70.82
CDY55389	Canola	cytosol	82.34	70.77
TraesCS3B01G329800.1	Wheat	cytosol, golgi	81.5	70.7
TraesCS3A01G306700.1	Wheat	cytosol	81.5	70.7
HORVU3Hr1G073020.2	Barley	cytosol	81.5	70.7
CDY47982	Canola	cytosol	81.98	70.68
TraesCS3D01G295200.1	Wheat	cytosol	81.26	70.5
GSMUA_Achr9P06420_001	Banana	cytosol	79.24	68.52
CDY32329	Canola	cytosol	23.27	62.7
CDY53032	Canola	golgi, mitochondrion	3.94	46.48
CDX85005	Canola	cytosol	33.89	26.95
CDY04256	Canola	cytosol	33.17	26.78
CDY07365	Canola	cytosol	33.05	26.69
CDX77888	Canola	endoplasmic reticulum, golgi	8.35	25.83
CDY16140	Canola	plastid	34.25	25.24
CDY28081	Canola	cytosol	8.59	14.49

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
GO:A0A078I954	UniProt:A0A078I954	EnsemblPlants:CDY45929	ProteinID:CDY45929	ProteinID:CDY45929.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00082920001	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	PFAM:PF00311
PRINTS:PR00150	ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF11	MetaCyc:PWY-1622	MetaCyc:PWY-241
MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117
MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI0004EF1246	SEG:seg	:

Description

BnaC06g09980DBnaC06g09980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I954]

Coordinates

chrLK032642:+:57874..62373

Molecular Weight (calculated)

95675.8 Da

IEP (calculated)

6.095

GRAVY (calculated)

-0.399

Length

838 amino acids

Sequence
(BLAST)

001: MPHGKLEKMA SMDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKSQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFELSMWR CNDELRVRAD ELHVNRRKDA AKHYIEFWKS IPPTEPYRVI LGDVRDKLYH TRERARQLLS NGTSDVPEEA
401: TFNNLEEIAD VLDTFHVIAE LPSDSFGAYI ISMATSPSDV LAVELLQREC HVKRPLRVVP LFEKLADLEA APAAVARLFS VDWYKNRINA QEELVKVAKE
501: YGVKLTMFHG RGGTVGRGGG PTHLAILSQP PDTINGSLRV TVQGEVIEQS FGEEHLCFRT LQRFTSATLE HGMHPPVSPK PEWRTLLDEM AVVATEEYRS
601: VVFQEPRFVE YFRLATPELE YGRMNIGSRP SKRKPSGGIE SLRAIPWIFA WTQTRFHLPV WLGFGAAIKH VVEKDVKNLH MLQDMYKHWP FFRVTIDLIE
701: MVFAKGDPGI AALYDKLLVS EELWPFGDKL RANFEETKKL VLQTAGHKDL LEDDPYLKQR LRLRNSYITT LNVCQAYTLK RIRDPSYNVT LRPHISKEIA
801: ESSKELIELN PTSEYAPGLE DTLILTMKGV AAGLQNTG

Best Arabidopsis Sequence Match ( AT1G53310.1 )
(BLAST)

001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG

Arabidopsis Description

PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.