CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85005	Canola	cytosol	67.61	31.88
TraesCS3B01G011200.1	Wheat	cytosol	57.95	29.72
CDY16140	Canola	plastid	67.4	29.46
CDY07365	Canola	cytosol	60.56	29.0
CDY04256	Canola	cytosol	60.16	28.81
KRH34779	Soybean	cytosol	59.56	28.68
Solyc04g006970.2.1	Tomato	plastid	59.76	28.29
Zm00001d040129_P001	Maize	cytosol	58.35	28.05
HORVU3Hr1G000940.2	Barley	cytosol	58.95	27.96
PGSC0003DMT400019322	Potato	cytosol	58.95	27.9
TraesCS3B01G008500.1	Wheat	cytosol	58.55	27.82
TraesCS3D01G005000.1	Wheat	cytosol	58.55	27.77
EES00444	Sorghum	cytosol	57.95	27.75
KRH71121	Soybean	cytosol	58.35	27.49
VIT_01s0011g02740.t01	Wine grape	cytosol	58.55	27.43
KRH75540	Soybean	cytosol	57.95	27.27
Os01t0110700-01	Rice	cytosol	56.74	27.25
KRH70911	Soybean	cytosol	19.52	27.09
KRH70922	Soybean	cytosol	21.33	26.5
KRH70912	Soybean	cytosol, golgi, nucleus	21.33	26.43
GSMUA_Achr1P20720_001	Banana	cytosol	58.75	25.8
KRH70920	Soybean	cytosol	21.13	20.67
CDY32329	Canola	cytosol	12.27	19.61
KRH70915	Soybean	cytosol	23.34	17.06
CDX75798	Canola	cytosol	23.54	16.43
CDX77888	Canola	endoplasmic reticulum, golgi	7.85	14.39
KRH70917	Soybean	cytosol	24.95	12.63
CDY02513	Canola	cytosol	24.35	12.55
CDY51508	Canola	cytosol	24.14	12.45
CDY14847	Canola	cytosol	24.14	12.45
CDY55389	Canola	cytosol	24.35	12.41
CDY47982	Canola	cytosol	24.14	12.35
CDX98516	Canola	cytosol	23.14	12.33
CDX82457	Canola	cytosol	17.5	11.24
CDY25721	Canola	cytosol	19.92	11.11
CDX97618	Canola	cytosol	17.3	11.08
CDY32330	Canola	cytosol	4.02	9.66
CDY45929	Canola	cytosol	14.49	8.59
CDY53032	Canola	golgi, mitochondrion	0.2	1.41
CDY32328	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:35.1
GO:A0A078GRN4	UniProt:A0A078GRN4	EnsemblPlants:CDY28081	ProteinID:CDY28081	ProteinID:CDY28081.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00039034001	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	PFAM:PF00311
PRINTS:PR00150	ScanProsite:PS00393	PANTHER:PTHR30523	PANTHER:PTHR30523:SF6	MetaCyc:PWY-1622	MetaCyc:PWY-241
MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117
MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI0004EC30EF	SEG:seg	:

Description

BnaC06g02620DBnaC06g02620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRN4]

Coordinates

chrLK032214:-:47240..49937

Molecular Weight (calculated)

54924.6 Da

IEP (calculated)

4.906

GRAVY (calculated)

-0.325

Length

497 amino acids

Sequence
(BLAST)

001: MSRWMAIDLY IREIDSLRFE LSMNRCSDRL SRLADEILEK EISAQEDIES WGTNVGRSQP KFPNQQGLSL PTQLPPRADL PLCAECGESQ YPKLEVPVTD
101: YIPLSRQDVQ GISSDGYGPN LQIKTGNGNS VNSNGSQQTI TPRGSSSSSS QLLLQKKLLA DSQIGRTSFQ KLLEPTPPKR AGIAPYRIVL GEVEEKLLKT
201: RRLLELLLEG LPCEYDPWDY YETSDQLLEP LLLCYESLHS SDSGVLADGR LADLIRRVAT FGMVLMKLDL RQEAAKHSEA LDTITTYLDM GTYSEWDEEK
301: KLEFLTRELK GKRPLIPPNI EVGPEVKEVL DTFRVAAELG SESLRAYVIS MASDASDVLA VELLQKDARL AVSGDLGRPC PAGTLRVVPL FETVKDLRGA
401: GSVIRKLLSI DCYREHIEKN HTGHQEIMVG YSDSGKDAGR FTAAWELYKA QEDVVAACNE FGIKVTLFHG RGGSIGRGGG PTYLAIQSQP PGSVMVS

Best Arabidopsis Sequence Match ( AT1G68750.1 )
(BLAST)

0001: MTDTTDDIAE EISFQSFEDD CKLLGSLFHD VLQREVGNPF MEKVERIRIL AQSALNLRMA GIEDTANLLE KQLTSEISKM PLEEALTLAR TFTHSLNLMG
0101: IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
0201: LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
0401: SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
0501: LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
0601: ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
0701: AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
0801: PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
0901: ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1001: LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG

Arabidopsis Description

PPC4PPC4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7Q9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.