CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53032	Canola	golgi, mitochondrion	13.04	38.03
CDX75798	Canola	cytosol	78.74	22.89
CDY45929	Canola	cytosol	90.82	22.43
CDY25721	Canola	cytosol	90.82	21.1
CDX82457	Canola	cytosol	78.74	21.06
CDX97618	Canola	cytosol	76.81	20.49
CDY02513	Canola	cytosol	90.82	19.5
CDY51508	Canola	cytosol	80.68	17.32
CDY14847	Canola	cytosol	80.19	17.22
CDY47982	Canola	cytosol	80.68	17.18
CDX98516	Canola	cytosol	77.29	17.15
CDY55389	Canola	cytosol	80.68	17.13
CDX85005	Canola	cytosol	29.47	5.79
CDY04256	Canola	cytosol	28.99	5.78
CDY07365	Canola	cytosol	28.99	5.78
CDY16140	Canola	plastid	29.95	5.45
CDX77888	Canola	endoplasmic reticulum, golgi	5.8	4.43
CDY28081	Canola	cytosol	9.66	4.02
CDY32329	Canola	cytosol	0.0	0.0
CDY32328	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	MapMan:35.1	GO:A0A078H0U1
UniProt:A0A078H0U1	EnsemblPlants:CDY32330	ProteinID:CDY32330	ProteinID:CDY32330.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009987
GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00051837001	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	PFAM:PF00311	PRINTS:PR00150
ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF11	MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913
MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI0004EE49D9	SEG:seg	:	:

Description

BnaC01g36490DBnaC01g36490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0U1]

Coordinates

chrLK032292:-:174231..175396

Molecular Weight (calculated)

23741.2 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.587

Length

207 amino acids

Sequence
(BLAST)

001: MSEDDKLIEY DALLLDLFLD ILHDLHELYE LSAKYEGKHE PKKLEELGKV LTSLDPGDSI VISKAFSHML NLANLAEEVQ IAYRRRIKKL KKGDFVDESS
101: AATESDIEET FKRLVSDLGK SPEEIFDALK NQTVDLVLTA HPTQSVRRSL LQKHGRIRDC LAQLYTKDIT PDDKQELDES LQREIQAAFR TDEIKRMPPT
201: SQDEMRA

Best Arabidopsis Sequence Match ( AT1G53310.1 )
(BLAST)

001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG

Arabidopsis Description

PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.