CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14847	Canola	cytosol	98.44	98.44
CDY55389	Canola	cytosol	98.86	97.74
AT2G42600.1	Thale cress	cytosol	97.3	97.4
CDY47982	Canola	cytosol	97.82	97.02
CDY32328	Canola	cytosol	3.73	85.71
CDX75798	Canola	cytosol	62.24	84.27
CDY02513	Canola	cytosol	84.23	84.23
CDY25721	Canola	cytosol	77.39	83.73
CDX98516	Canola	cytosol	80.71	83.39
CDX82457	Canola	cytosol	66.81	83.2
CDY45929	Canola	cytosol	72.1	82.94
CDX97618	Canola	cytosol	66.6	82.73
CDY32330	Canola	cytosol	17.32	80.68
CDY32329	Canola	cytosol	25.52	79.1
HORVU1Hr1G017740.5	Barley	cytosol	15.35	57.59
Zm00001d037294_P001	Maize	cytosol	6.22	48.0
CDY53032	Canola	golgi, mitochondrion	3.53	47.89
CDX77888	Canola	endoplasmic reticulum, golgi	8.92	31.73
CDY07365	Canola	cytosol	32.99	30.64
CDY04256	Canola	cytosol	32.78	30.44
CDX85005	Canola	cytosol	32.88	30.08
CDY16140	Canola	plastid	32.99	27.97
CDY28081	Canola	cytosol	12.45	24.14

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
GO:A0A078IR15	UniProt:A0A078IR15	EnsemblPlants:CDY51508	ProteinID:CDY51508	ProteinID:CDY51508.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00003606001	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase
InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781
PANTHER:PTHR30523	PANTHER:PTHR30523:SF12	MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142
MetaCyc:PWY-6146	MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
SUPFAM:SSF51621	UniParc:UPI0004EDE6FD	SEG:seg	:	:	:

Description

BnaC04g02430DBnaC04g02430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR15]

Coordinates

chrLK033003:+:8691..13451

Molecular Weight (calculated)

109936.0 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.383

Length

964 amino acids

Sequence
(BLAST)

001: MATGSLKKMA SIDAQLRLIA PSKVSEDDKL VEYDALLLDR FLDILQDLHG EEVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAEA QRCAKRDAKH YIEFWKQIPS NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESDRHTDVFD AITQHLGIGS YKEWSEDKRQ DWLLSELSGK RPLFGPDLPK
501: TEEIADVLDT FKVISELPYD SFGAYIISMA TAPSDVLAVE LLQRECGITH PLRVVPLFEK LADLENAPAS VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEFGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAVIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGAA FKRVIQKDAK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLTK DYMESSKPAA ELVKLNPKSE YAPGLEDTVI LTMKGIAAGM QNTG

Best Arabidopsis Sequence Match ( AT2G42600.3 )
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG

Arabidopsis Description

PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.