CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82457	Canola	cytosol	92.6	37.21
CDX97618	Canola	cytosol	91.0	36.47
CDX75798	Canola	cytosol	81.03	35.39
CDX98516	Canola	cytosol	91.32	30.44
CDY02513	Canola	cytosol	86.5	27.9
CDY25721	Canola	cytosol	78.14	27.27
CDY14847	Canola	cytosol	80.06	25.83
CDY51508	Canola	cytosol	79.1	25.52
CDY47982	Canola	cytosol	79.42	25.41
CDY55389	Canola	cytosol	78.78	25.13
CDY45929	Canola	cytosol	62.7	23.27
CDY28081	Canola	cytosol	19.61	12.27
CDY04256	Canola	cytosol	36.01	10.79
CDY07365	Canola	cytosol	35.05	10.5
CDX85005	Canola	cytosol	34.73	10.25
CDY16140	Canola	plastid	34.73	9.5
CDX77888	Canola	endoplasmic reticulum, golgi	4.82	5.54
CDY32330	Canola	cytosol	0.0	0.0
CDY32328	Canola	cytosol	0.0	0.0
CDY53032	Canola	golgi, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:35.1
GO:A0A078H4K0	UniProt:A0A078H4K0	EnsemblPlants:CDY32329	ProteinID:CDY32329	ProteinID:CDY32329.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00051836001	InterPro:PEP_COase	PFAM:PF00311	PANTHER:PTHR30523
PANTHER:PTHR30523:SF11	MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146
MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621
UniParc:UPI0004EE4996	:	:	:	:	:

Description

BnaC01g36480DBnaC01g36480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4K0]

Coordinates

chrLK032292:-:172194..174108

Molecular Weight (calculated)

35847.6 Da

IEP (calculated)

4.709

GRAVY (calculated)

-0.459

Length

311 amino acids

Sequence
(BLAST)

001: MGGDRDGNPR VTPELSMWRC TDEFRVAADV IHRNSRKDAA KHYIEFWKTI PPTEPYRVVL GDVRDTLYHT RERTRQLLSN GISDIPEEAT FTDVEQFLEP
101: LELCYRSLCS SGDRPIADGT LLDFLRQVST FGLSLVRLDI RQEDWSEERR QEWLLAELRG KRPLFGLDLP KTEEIADVLD TFKVISELPS DCFGAYIISM
201: ATSPSDVLVV ELLQRECHTA ATLEHGMNPP VSPKPEWRAL LDGMVVVATE EYRSVVFQEP RFVEYFRLAT PELEYGQPRP SGIKKTEYLE GDPYLKQRLR
301: LRDSYITTLN D

Best Arabidopsis Sequence Match ( AT1G53310.1 )
(BLAST)

001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG

Arabidopsis Description

PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.