Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07365 | Canola | cytosol | 90.56 | 90.56 |
| AT1G68750.1 | Thale cress | cytosol | 82.08 | 82.56 |
| CDX85005 | Canola | cytosol | 79.19 | 77.99 |
| CDY16140 | Canola | plastid | 78.71 | 71.86 |
| Zm00001d040129_P001 | Maize | cytosol | 69.46 | 69.73 |
| Os01t0110700-01 | Rice | cytosol | 69.27 | 69.47 |
| EES00444 | Sorghum | cytosol | 68.98 | 68.98 |
| TraesCS3B01G011200.1 | Wheat | cytosol | 63.58 | 68.11 |
| HORVU3Hr1G000940.2 | Barley | cytosol | 68.59 | 67.94 |
| TraesCS3D01G005000.1 | Wheat | cytosol | 68.3 | 67.65 |
| TraesCS3B01G008500.1 | Wheat | cytosol | 68.02 | 67.5 |
| GSMUA_Achr1P20720_001 | Banana | cytosol | 66.76 | 61.22 |
| CDY28081 | Canola | cytosol | 28.81 | 60.16 |
| CDY32329 | Canola | cytosol | 10.79 | 36.01 |
| CDX82457 | Canola | cytosol | 26.78 | 35.92 |
| CDX97618 | Canola | cytosol | 26.69 | 35.7 |
| CDY25721 | Canola | cytosol | 29.77 | 34.68 |
| CDX98516 | Canola | cytosol | 30.83 | 34.3 |
| CDY02513 | Canola | cytosol | 31.79 | 34.23 |
| CDY45929 | Canola | cytosol | 26.78 | 33.17 |
| CDY51508 | Canola | cytosol | 30.44 | 32.78 |
| CDY14847 | Canola | cytosol | 30.06 | 32.37 |
| CDX75798 | Canola | cytosol | 21.97 | 32.02 |
| CDY55389 | Canola | cytosol | 30.06 | 32.0 |
| CDY47982 | Canola | cytosol | 29.58 | 31.58 |
| CDY32330 | Canola | cytosol | 5.78 | 28.99 |
| CDY32328 | Canola | cytosol | 1.16 | 28.57 |
| CDY53032 | Canola | golgi, mitochondrion | 1.73 | 25.35 |
| CDX77888 | Canola | endoplasmic reticulum, golgi | 4.82 | 18.45 |
Protein Annotations
| KEGG:00620+4.1.1.31 | KEGG:00680+4.1.1.31 | KEGG:00710+4.1.1.31 | KEGG:00720+4.1.1.31 | Gene3D:1.20.1440.90 | MapMan:1.4.1.1 |
| GO:A0A078ESM6 | EnsemblPlants:CDY04256 | ProteinID:CDY04256 | ProteinID:CDY04256.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006091 | GO:GO:0006099 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008964 | GO:GO:0009987 |
| GO:GO:0015977 | EnsemblPlantsGene:GSBRNA2T00117989001 | HAMAP:MF_00595 | InterPro:PEPCASE_His_AS | InterPro:PEP_COase | InterPro:PEP_COase_Lys_AS |
| InterPro:PEP_COase_bac/pln-type | PFAM:PF00311 | PRINTS:PR00150 | ScanProsite:PS00393 | ScanProsite:PS00781 | PANTHER:PTHR30523 |
| PANTHER:PTHR30523:SF6 | MetaCyc:PWY-1622 | MetaCyc:PWY-241 | MetaCyc:PWY-5913 | MetaCyc:PWY-6142 | MetaCyc:PWY-6146 |
| MetaCyc:PWY-6549 | MetaCyc:PWY-7115 | MetaCyc:PWY-7117 | MetaCyc:PWY-7124 | InterPro:Pyrv/PenolPyrv_Kinase-like_dom | SUPFAM:SSF51621 |
| UniParc:UPI0004EB3561 | SEG:seg | : | : | : | : |
Description
BnaC06g25590D
Coordinates
chrLK031950:-:585353..590927
Molecular Weight (calculated)
116774.0 Da
IEP (calculated)
6.296
GRAVY (calculated)
-0.383
Length
1038 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTDTTDDIAE EISFQSFEDD CKLLGSLFND VLQREVGSSF MEKIERIRIL AQSALNLRLA GIEDTANLLE KQLSCEISKM PLEEALTLAR AFTHSLNLMS
0101: IADTHHRMHK LIDVTQLSRS CDDIFTQLLQ SGISSEELYK TVCKQEVEIV LTAHPTQINR RTLQYKHVRI ANLLEYNSRS DIGHEDRETL IEDLVREITS
0201: VWQTDELRRQ KPTPVDEART GLNIVEQSLW KAVPHYLRRV SNSLRKFTGK PLPLTCTPIK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAE DILEKDSSEK DSDRGQSSFL NQQNSSLPTQ LPDKAQHPSC IEDGDSQHPK FEINTTTDFV PPNLQKQNEE DSPKIDSKPI
0401: ADDTHTAGLT SRGSFSSTSQ LLFQRKLFAE SKIGRASFQK LLEPPPLKRA GMAPYRIVLG DVKDKLVKTR KLLELLLEGL PCEYDPRVSY ETSEQLLEPL
0501: LLCYESLQSS GAGVLADGKL ADLIRRVSTF GMVLVKLDLR QESARHAEAL DAITTYLDLG TYSEWDEEKK LDFLTKELKG KRPLVPPTIE VVPEVKEVLD
0601: TFRVAAEFGS ESLGAYVISM ASNASDVLAV ELLQKDTRLA VTSEHGKPCP GGTLRVVPLF ETVKDLRAAG SVIRKLLSID WYREHIQKNH HGHQEVMVGY
0701: SDSGKDAGRF TAAWELYKAQ EDVVAACNEF GIKITLFHGR GGSIGRGGGP TYLAIQSQPP GSVMGSLRST EQGEMVQAKF GIPQTAVRQL EIYTTAVLLA
0801: TLKPPQPPRE KKWRNLMEEI STISSQNYKG TVYENPEFIS YFHEATPQAE LGYLNIGSRP ARRKSSTGIG HLRAIPWVFA WTQTRFVLPA WLGVGAGLKG
0901: VSEKGYADDI QEMYKEWPFF QSTIDLIEMV LAKADIPITK LYDEQLVSEN RRGLGDMLRK ELMTTEKYVL VITGREKLLE SNKSLKKLIE SRLPYLNAMN
1001: MLQVEVLKRL RRDEDNNKLR DALLITINGI AAGMRNTG
0101: IADTHHRMHK LIDVTQLSRS CDDIFTQLLQ SGISSEELYK TVCKQEVEIV LTAHPTQINR RTLQYKHVRI ANLLEYNSRS DIGHEDRETL IEDLVREITS
0201: VWQTDELRRQ KPTPVDEART GLNIVEQSLW KAVPHYLRRV SNSLRKFTGK PLPLTCTPIK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAE DILEKDSSEK DSDRGQSSFL NQQNSSLPTQ LPDKAQHPSC IEDGDSQHPK FEINTTTDFV PPNLQKQNEE DSPKIDSKPI
0401: ADDTHTAGLT SRGSFSSTSQ LLFQRKLFAE SKIGRASFQK LLEPPPLKRA GMAPYRIVLG DVKDKLVKTR KLLELLLEGL PCEYDPRVSY ETSEQLLEPL
0501: LLCYESLQSS GAGVLADGKL ADLIRRVSTF GMVLVKLDLR QESARHAEAL DAITTYLDLG TYSEWDEEKK LDFLTKELKG KRPLVPPTIE VVPEVKEVLD
0601: TFRVAAEFGS ESLGAYVISM ASNASDVLAV ELLQKDTRLA VTSEHGKPCP GGTLRVVPLF ETVKDLRAAG SVIRKLLSID WYREHIQKNH HGHQEVMVGY
0701: SDSGKDAGRF TAAWELYKAQ EDVVAACNEF GIKITLFHGR GGSIGRGGGP TYLAIQSQPP GSVMGSLRST EQGEMVQAKF GIPQTAVRQL EIYTTAVLLA
0801: TLKPPQPPRE KKWRNLMEEI STISSQNYKG TVYENPEFIS YFHEATPQAE LGYLNIGSRP ARRKSSTGIG HLRAIPWVFA WTQTRFVLPA WLGVGAGLKG
0901: VSEKGYADDI QEMYKEWPFF QSTIDLIEMV LAKADIPITK LYDEQLVSEN RRGLGDMLRK ELMTTEKYVL VITGREKLLE SNKSLKKLIE SRLPYLNAMN
1001: MLQVEVLKRL RRDEDNNKLR DALLITINGI AAGMRNTG
0001: MTDTTDDIAE EISFQSFEDD CKLLGSLFHD VLQREVGNPF MEKVERIRIL AQSALNLRMA GIEDTANLLE KQLTSEISKM PLEEALTLAR TFTHSLNLMG
0101: IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
0201: LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
0401: SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
0501: LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
0601: ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
0701: AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
0801: PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
0901: ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1001: LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG
0101: IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
0201: LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
0401: SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
0501: LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
0601: ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
0701: AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
0801: PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
0901: ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1001: LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG
Arabidopsis Description
PPC4PPC4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7Q9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.