CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016866.1-P	Field mustard	cytosol	98.15	98.96
CDY14847	Canola	cytosol	98.15	98.96
CDY55389	Canola	cytosol	98.15	97.85
CDY51508	Canola	cytosol	97.02	97.82
AT2G42600.1	Thale cress	cytosol	95.58	96.47
CDX75798	Canola	cytosol	61.73	84.27
CDY02513	Canola	cytosol	82.92	83.61
CDX98516	Canola	cytosol	79.63	82.96
CDY25721	Canola	cytosol	75.93	82.83
CDX82457	Canola	cytosol	65.74	82.56
CDX97618	Canola	cytosol	65.53	82.09
CDY45929	Canola	cytosol	70.68	81.98
CDY32330	Canola	cytosol	17.18	80.68
CDY32329	Canola	cytosol	25.41	79.42
CDY32328	Canola	cytosol	3.29	76.19
HORVU1Hr1G017740.5	Barley	cytosol	14.92	56.42
Zm00001d037294_P001	Maize	cytosol	6.17	48.0
CDY53032	Canola	golgi, mitochondrion	3.5	47.89
CDX77888	Canola	endoplasmic reticulum, golgi	8.85	31.73
CDY07365	Canola	cytosol	31.79	29.77
CDY04256	Canola	cytosol	31.58	29.58
CDX85005	Canola	cytosol	31.89	29.41
CDY16140	Canola	plastid	32.0	27.35
CDY28081	Canola	cytosol	12.35	24.14

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
GO:A0A078ID12	UniProt:A0A078ID12	EnsemblPlants:CDY47982	ProteinID:CDY47982	ProteinID:CDY47982.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSBRNA2T00088609001	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase
InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781
PANTHER:PTHR30523	PANTHER:PTHR30523:SF12	MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142
MetaCyc:PWY-6146	MetaCyc:PWY-6549	MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
SUPFAM:SSF51621	UniParc:UPI0004EECF9F	SEG:seg	:	:	:

Description

BnaA04g24600DBnaA04g24600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID12]

Coordinates

chrLK032747:-:78794..86674

Molecular Weight (calculated)

111103.0 Da

IEP (calculated)

5.991

GRAVY (calculated)

-0.391

Length

972 amino acids

Sequence
(BLAST)

001: MATGSLKKMG SIDAQLRLIA PAKVSEDDKL VEYDALLLDR FLDILQDLHG EEVREFVQEC YEVAADYDGN RNTAKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAEV QRCAKRDAKH YIEFWKQIPS NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDIPEDSVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESDRHTDVLD AITQHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGHDLPK
501: TEEITDVLDT FKVISELPHD SFGAYIISMA TAPSDVLAVE LLQRECGITH PLRVVPLFEK LADLENAPAS VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVEGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAVIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGSA FKRVIQKDAK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSKPAA ELVKLNPKSE YAPGLEDTVI LTMKGIAAGD YYRYLAELKI RT

Best Arabidopsis Sequence Match ( AT2G42600.3 )
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG

Arabidopsis Description

PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.