CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32329	Canola	cytosol	35.39	81.03
CDY32330	Canola	cytosol	22.89	78.74
CDX98516	Canola	cytosol	97.19	74.17
Bra001575.1-P	Field mustard	cytosol	98.74	72.7
AT3G14940.1	Thale cress	cytosol	96.21	70.76
CDX82457	Canola	cytosol	76.69	70.54
CDX97618	Canola	cytosol	75.28	69.07
CDY02513	Canola	cytosol	90.45	66.81
GSMUA_Achr4P08030_001	Banana	cytosol	87.08	66.24
VIT_12s0028g02180.t01	Wine grape	cytosol	89.33	65.91
VIT_19s0014g01390.t01	Wine grape	cytosol	88.9	65.73
GSMUA_Achr6P26850_001	Banana	cytosol	86.66	65.64
CDY25721	Canola	cytosol	81.18	64.87
KRH27044	Soybean	nucleus	87.92	64.8
EES13699	Sorghum	cytosol	87.22	64.42
Solyc10g007290.2.1	Tomato	cytosol, plastid	86.8	64.11
KRH27345	Soybean	endoplasmic reticulum	86.94	64.01
KRH55745	Soybean	cytosol, endoplasmic reticulum, nucleus	86.8	63.98
PGSC0003DMT400054791	Potato	cytosol	86.52	63.9
Solyc07g055060.2.1	Tomato	nucleus	86.52	63.9
GSMUA_Achr10P...	Banana	cytosol	84.27	63.9
GSMUA_Achr6P14490_001	Banana	cytosol	84.27	63.9
Os01t0758300-01	Rice	cytosol, plasma membrane	82.87	63.85
PGSC0003DMT400052608	Potato	cytosol	85.81	63.85
PGSC0003DMT400039809	Potato	cytosol	86.52	63.83
KRH21974	Soybean	cytosol	86.66	63.81
Os08t0366000-01	Rice	cytosol, plasma membrane	86.38	63.8
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	86.24	63.63
KRH55092	Soybean	nucleus	86.38	63.6
GSMUA_Achr9P06420_001	Banana	cytosol	86.38	63.47
KRH22285	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	87.08	63.39
EER98700	Sorghum	cytosol	85.81	63.19
KRH26228	Soybean	nucleus	85.81	63.19
CDY45929	Canola	cytosol	74.02	62.89
PGSC0003DMT400032245	Potato	cytosol	84.97	62.76
HORVU5Hr1G055350.3	Barley	cytosol	85.53	62.65
TraesCS5D01G186200.1	Wheat	cytosol	85.39	62.55
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	85.25	62.45
TraesCS5A01G181800.1	Wheat	cytosol, golgi	85.25	62.45
CDY14847	Canola	cytosol	84.55	62.45
Zm00001d020057_P004	Maize	cytosol, extracellular	85.53	62.27
CDY51508	Canola	cytosol	84.27	62.24
Solyc07g062530.2.1	Tomato	cytosol, nucleus, plastid	84.13	62.14
KXG33409	Sorghum	cytosol	83.85	61.8
CDY47982	Canola	cytosol	84.27	61.73
CDY55389	Canola	cytosol	84.41	61.64
Zm00001d012702_P008	Maize	cytosol	83.57	61.59
HORVU3Hr1G073020.2	Barley	cytosol	83.43	61.49
TraesCS3B01G329800.1	Wheat	cytosol, golgi	83.29	61.39
TraesCS3A01G306700.1	Wheat	cytosol	83.15	61.28
TraesCS3D01G295200.1	Wheat	cytosol	83.15	61.28
CDY53032	Canola	golgi, mitochondrion	4.78	47.89
CDX77888	Canola	endoplasmic reticulum, golgi	12.64	33.21
CDY28081	Canola	cytosol	16.43	23.54
CDY04256	Canola	cytosol	32.02	21.97
CDY07365	Canola	cytosol	31.88	21.87
CDX85005	Canola	cytosol	31.6	21.35
CDY16140	Canola	plastid	31.88	19.96
CDY32328	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
GO:A0A078CL56	EnsemblPlants:CDX75798	ProteinID:CDX75798	ProteinID:CDX75798.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009987
GO:GO:0015977	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00123751001	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS
PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF11
MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI0004EEE03D
SEG:seg	:	:	:	:	:

Description

BnaC03g38810D

Coordinates

chrLK031805:+:776035..781533

Molecular Weight (calculated)

81362.0 Da

IEP (calculated)

5.231

GRAVY (calculated)

-0.450

Length

712 amino acids

Sequence
(BLAST)

001: MAGRNIEKMA SIDAQLRQLA PAKVSEDDKL IEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK PNLAEEVQIA YRRRIKKLKK GDFVDESSAA
101: TESDIEETFK RLVSDLGKSP EEIFDALKNQ TVDLVLTAHP TQSVRRSLLQ KHGRIRDCLA QLYAKDITPD DKQELDESLQ REIQAAFRTD EIRRTPPTPQ
201: DEMRAGMSYF HETIWNGVPK FLRRVDTALK NIGIDERVPY NAPLIQFSSW MGGDRDGNPR VTPEVTRDVC LLARMMAANL YYNQIENLMF ELSMWRCTDE
301: FRAKADEIHR NSRKDAAKHY IEFWKTIPPT EPYRVILGDV RDKLYHTRER SRQLLSNGIS DIPEEATFTN VEQFLEPLEL CYRSLCSCGD RPIADGTLLD
401: FLRQVSTFGL SLVRLDIRQE SERHTDVLDA ITKHLDGSSY REWSEERRQE WLLSELSGKR PLFGPDLPKT EEIADVLDTF KVISELPSDC FGAYIISMAT
501: SPSDVLAVEL LQRECHVKTP LRVVPLFEKL ADLEAAPAAV SRLFSLDWYK NRINGKQEVM IGYSDSGKDA GRLSAAWELY KAQEELVKVA KKYGVKLTMF
601: HGRGGTVGRG GGPTHLAILS QPPDTVNGSL RVTVQGEVIE QSFGEEHLCF RTLQRFTAAT LEHGMNPPVS PKPEWRALLD AMAVVATEEY RCVVFQEPRF
701: VEYFRLSTRR II

Best Arabidopsis Sequence Match ( AT1G53310.1 )
(BLAST)

001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG

Arabidopsis Description

PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.