Factsheet for VIT_19s0014g01390.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P08030_001	Banana	cytosol	88.68	91.24
PGSC0003DMT400039809	Potato	cytosol	91.38	91.19
KRH26228	Soybean	nucleus	91.28	90.9
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	90.97	90.78
KRH55092	Soybean	nucleus	90.86	90.49
VIT_12s0028g02180.t01	Wine grape	cytosol	90.65	90.47
GSMUA_Achr6P26850_001	Banana	cytosol	88.16	90.32
Solyc10g007290.2.1	Tomato	cytosol, plastid	90.34	90.25
PGSC0003DMT400054791	Potato	cytosol	90.34	90.25
CDX75798	Canola	cytosol	65.73	88.9
KRH21974	Soybean	cytosol	89.2	88.83
AT1G53310.3	Thale cress	cytosol	89.1	88.73
AT3G14940.1	Thale cress	cytosol	88.99	88.53
CDX98516	Canola	cytosol	85.77	88.53
KRH27345	Soybean	endoplasmic reticulum	88.89	88.52
Bra001575.1-P	Field mustard	cytosol	88.89	88.52
EES13699	Sorghum	cytosol	88.47	88.38
Bra027293.1-P	Field mustard	cytosol	88.68	88.31
CDX82457	Canola	cytosol	70.92	88.24
CDX97618	Canola	cytosol	71.03	88.14
CDY02513	Canola	cytosol	88.06	87.97
Bra030945.1-P	Field mustard	cytosol	88.06	87.97
VIT_19s0015g00410.t01	Wine grape	cytosol	7.48	87.8
EER98700	Sorghum	cytosol	88.16	87.8
Os08t0366000-01	Rice	cytosol, plasma membrane	87.85	87.76
Os01t0758300-01	Rice	cytosol, plasma membrane	84.01	87.55
PGSC0003DMT400032245	Potato	cytosol	87.54	87.45
CDY25721	Canola	cytosol	80.89	87.43
KXG33409	Sorghum	cytosol	87.02	86.75
Zm00001d012702_P008	Maize	cytosol	86.81	86.54
CDY45929	Canola	cytosol	75.29	86.52
Solyc07g062530.2.1	Tomato	cytosol, nucleus, plastid	86.19	86.1
Zm00001d020057_P004	Maize	cytosol, extracellular	87.33	85.99
TraesCS3B01G329800.1	Wheat	cytosol, golgi	86.19	85.92
GSMUA_Achr6P14490_001	Banana	cytosol	83.7	85.84
HORVU3Hr1G073020.2	Barley	cytosol	86.09	85.82
HORVU5Hr1G055350.3	Barley	cytosol	86.6	85.8
TraesCS5A01G181800.1	Wheat	cytosol, golgi	86.5	85.7
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	86.5	85.7
TraesCS5D01G186200.1	Wheat	cytosol	86.4	85.6
GSMUA_Achr10P...	Banana	cytosol	83.39	85.52
TraesCS3A01G306700.1	Wheat	cytosol	85.77	85.51
TraesCS3D01G295200.1	Wheat	cytosol	85.77	85.51
GSMUA_Achr9P06420_001	Banana	cytosol	83.9	83.38
VIT_01s0011g02740.t01	Wine grape	cytosol	33.85	30.73

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
EntrezGene:100267525	wikigene:100267525	EMBL:AM460476	ProteinID:CAN72376	ProteinID:CAN72376.1	ProteinID:CCB46255
ProteinID:CCB46255.1	UniProt:F6H2N7	EMBL:FN595229	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006091
GO:GO:0006099	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0015977	GO:GO:0048046	GO:GO:0048366	EntrezGene:LOC100267525
wikigene:LOC100267525	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type
PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF11
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	TIGR:TC59435	UniParc:UPI00015C756F	ArrayExpress:VIT_19s0014g01390	EnsemblPlantsGene:VIT_19s0014g01390
EnsemblPlants:VIT_19s0014g01390.t01	unigene:Vvi.8139	RefSeq:XP_002285441	RefSeq:XP_002285441.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:1470390..1477013

Molecular Weight (calculated)

109829.0 Da

IEP (calculated)

6.069

GRAVY (calculated)

-0.381

Length

963 amino acids

Sequence
(BLAST)

001: MANRNIEKMA SIDAQLRLLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLKETVQEC YELSAEYEGK HDPKKLEELG NVLTSLDAGD SIVIAKSFSH
101: MLNLANLAEE VQIAYRRRNK LKKGDFADEN NATTESDIEE TLKKLVVQLK KSPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKHGRIRN CLAQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYYSQIED LMFELSMWRC NDELRVRADE LLRSSKKDAK HYIEFWKQIP PSEPYRVILG EVRDKLYQTR ERSRHLLAHG ISDIPGEATY
401: TNLEQFLEPL ELCYRSLCAC GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTDVI DAITRHLEIG SYREWSEERR QEWLLSELSG KRPLFGPDLP
501: KTEEIADVLD TFHVIAELPA DNFGAYIISM ATAPSDVLAV ELLQRECHVK QPLRVVPLFE KLADLEAAPA AVARLFSIDW YKNRINGKQE VMIGYSDSGK
601: DAGRLSAAWA LYKAQEELIK VAKQYGIKLT MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG SLRVTVQGEV IEQSFGEEHL CFRTLQRFTA ATLEHGMHPP
701: ISPKPEWRAL MDEMAVVATE NYRSIVFQEP RFVEYFRLAT PELEYGRMNI GSRPSKRKPS GGIESLRAIP WIFAWTQTRF HLPVWLGFGG AFKYAIEKDI
801: RNLHLLQEMY NEWPFFRVTI DLVEMVFAKG DPGIAALYDK LLVSKDLWSF GERLRSNYEQ TKSLLLQIAG HKDLLEGDPY LKQRLRLRDS YITTLNVCQA
901: CTLKRIRDPS YDVKVRPHIC KDIMESAAQE LVNLNPTSDY GPGLEDTLIL TMKGIAAGMQ NTG

Best Arabidopsis Sequence Match ( AT3G14940.2 )
(BLAST)

001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG

Arabidopsis Description

PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.