Factsheet for VIT_12s0028g02180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P08030_001	Banana	cytosol	88.08	90.81
VIT_19s0014g01390.t01	Wine grape	cytosol	90.47	90.65
GSMUA_Achr6P26850_001	Banana	cytosol	87.25	89.57
CDX75798	Canola	cytosol	65.91	89.33
EES13699	Sorghum	cytosol	88.91	89.0
CDX98516	Canola	cytosol	86.01	88.96
KRH26228	Soybean	nucleus	89.02	88.83
CDX82457	Canola	cytosol	71.09	88.63
KRH55092	Soybean	nucleus	88.7	88.52
CDX97618	Canola	cytosol	71.09	88.4
Os08t0366000-01	Rice	cytosol, plasma membrane	88.29	88.38
EER98700	Sorghum	cytosol	88.5	88.31
Bra001575.1-P	Field mustard	cytosol	88.39	88.21
AT3G14940.1	Thale cress	cytosol	88.39	88.12
Bra027293.1-P	Field mustard	cytosol	88.19	88.0
AT1G53310.3	Thale cress	cytosol	87.77	87.59
KRH27345	Soybean	endoplasmic reticulum	87.46	87.28
KRH21974	Soybean	cytosol	87.46	87.28
CDY02513	Canola	cytosol	87.15	87.24
Bra030945.1-P	Field mustard	cytosol	87.15	87.24
Os01t0758300-01	Rice	cytosol, plasma membrane	83.42	87.12
CDY25721	Canola	cytosol	80.31	86.98
Zm00001d020057_P004	Maize	cytosol, extracellular	87.88	86.71
KXG33409	Sorghum	cytosol	86.32	86.23
HORVU5Hr1G055350.3	Barley	cytosol	86.84	86.21
Zm00001d012702_P008	Maize	cytosol	86.11	86.02
TraesCS5A01G181800.1	Wheat	cytosol, golgi	86.63	86.01
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	86.63	86.01
CDY45929	Canola	cytosol	74.61	85.92
TraesCS5D01G186200.1	Wheat	cytosol	86.53	85.91
TraesCS3B01G329800.1	Wheat	cytosol, golgi	85.49	85.4
HORVU3Hr1G073020.2	Barley	cytosol	85.39	85.3
TraesCS3D01G295200.1	Wheat	cytosol	85.18	85.09
GSMUA_Achr6P14490_001	Banana	cytosol	82.8	85.09
TraesCS3A01G306700.1	Wheat	cytosol	85.08	84.99
GSMUA_Achr10P...	Banana	cytosol	82.49	84.77
GSMUA_Achr9P06420_001	Banana	cytosol	83.32	82.97
VIT_19s0015g00410.t01	Wine grape	cytosol	7.05	82.93
VIT_01s0011g02740.t01	Wine grape	cytosol	33.06	30.07

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
EntrezGene:100233103	wikigene:100233103	UniProt:A5AH72	ProteinID:AAL83719	ProteinID:AAL83719.1	EMBL:AF236126
EMBL:AM426708	ProteinID:CAN77927	ProteinID:CAN77927.1	ProteinID:CCB47365	ProteinID:CCB47365.1	EMBL:FN595235
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006091	GO:GO:0006099	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008964	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015977
GO:GO:0048046	GO:GO:0048366	EntrezGene:GPEPC	wikigene:GPEPC	HAMAP:MF_00595	InterPro:PEPCASE_His_AS
InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393
ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF23	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	TIGR:TC51810
TIGR:TC58903	UniParc:UPI000151EAA1	ArrayExpress:VIT_12s0028g02180	EnsemblPlantsGene:VIT_12s0028g02180	EnsemblPlants:VIT_12s0028g02180.t01	unigene:Vvi.5
RefSeq:XP_002280569	RefSeq:XP_002280569.1	RefSeq:XP_010657037.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:2965667..2972603

Molecular Weight (calculated)

110329.0 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.387

Length

965 amino acids

Sequence
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PAKVSEDDKL VEYDALLLDR FLDILQEIHG EDLKETVQEC YELSAEYEGK HDPQKLEELG RVITSLDAGD SIVVAKSFSN
101: MLTLANLAEE VQIAFRRRIK LKKGDFHDES SATTESDIEE TIKRLVVQLK KSPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKHARIRN CLAQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTAP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGIDER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYYSQIED LMFELSMWRC NEELRARADE LHRSSRRDAK HYIEFWKQVP PSEPYRVILG DVRDKLYSTR ERSRQLLSSG ISEIPEEAAF
401: TNVEQFLEPL ELCYRSLCAC GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTDVM DAITKHLEIG SYREWSEERR QEWLLAELRG KRPLFGPDLP
501: KTEEIADVLD TFHVISELPS DNFGAYIISM ATAPSDVLAV ELLQRECHVK KPLRVVPLFE KLADLEAAPA AVARLFSIDW YRNRIDGKQE VMIGYSDSGK
601: DAGRFSAAWQ LYKAQEALVK VAKQYGVKLT MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG SLRVTVQGEV IEQSFGEEHL CFRTLQRFTA ATLEHGMHPP
701: VSPKPEWRAL MDEMAVIATK EYRSIVFQEP RFVEYFRLAT PELEYGRMNI GSRPSKRKPS GGIESLRAIP WIFAWTQTRF HLPVWLGFGG AFKHVIGRDP
801: RNLPMLQQMY NEWPFFRVTI DLVEMVFAKG DPGIAALYDR LLVSEELWLF GKRLRTNYEE TKRLLLQIAG HRDLLEGDPY LKQRLRLRDA YITTLNVCQA
901: YTLKRIRDPN YHVMERPHLS KEIMESSKPA AELVKLNPTS EYAPGMEDTL ILTMKGIAAG LQNTG

Best Arabidopsis Sequence Match ( AT3G14940.2 )
(BLAST)

001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG

Arabidopsis Description

PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.