Factsheet for GSMUA_Achr6P26850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P08030_001	Banana	cytosol	92.23	92.63
VIT_19s0014g01390.t01	Wine grape	cytosol	90.32	88.16
VIT_12s0028g02180.t01	Wine grape	cytosol	89.57	87.25
EES13699	Sorghum	cytosol	89.04	86.83
GSMUA_Achr9P06420_001	Banana	cytosol	89.36	86.69
EER98700	Sorghum	cytosol	89.15	86.66
CDX75798	Canola	cytosol	65.64	86.66
KRH26228	Soybean	nucleus	88.83	86.35
KRH55092	Soybean	nucleus	88.72	86.25
PGSC0003DMT400039809	Potato	cytosol	88.3	86.01
KXG33409	Sorghum	cytosol	88.3	85.92
Os08t0366000-01	Rice	cytosol, plasma membrane	88.09	85.89
Os01t0758300-01	Rice	cytosol, plasma membrane	84.36	85.82
Zm00001d012702_P008	Maize	cytosol	88.09	85.71
GSMUA_Achr10P...	Banana	cytosol	85.32	85.41
KRH27345	Soybean	endoplasmic reticulum	87.77	85.32
KRH21974	Soybean	cytosol	87.77	85.32
HORVU3Hr1G073020.2	Barley	cytosol	87.66	85.3
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	87.55	85.28
Bra001575.1-P	Field mustard	cytosol	87.66	85.21
GSMUA_Achr6P14490_001	Banana	cytosol	85.11	85.2
TraesCS3B01G329800.1	Wheat	cytosol, golgi	87.55	85.2
Zm00001d020057_P004	Maize	cytosol, extracellular	88.62	85.17
PGSC0003DMT400054791	Potato	cytosol	87.34	85.17
CDY25721	Canola	cytosol	80.64	85.07
Solyc10g007290.2.1	Tomato	cytosol, plastid	87.23	85.06
Bra030945.1-P	Field mustard	cytosol	87.23	85.06
CDY02513	Canola	cytosol	87.23	85.06
AT3G14940.1	Thale cress	cytosol	87.55	85.02
AT1G53310.3	Thale cress	cytosol	87.45	85.01
TraesCS3D01G295200.1	Wheat	cytosol	87.23	84.89
TraesCS3A01G306700.1	Wheat	cytosol	87.02	84.68
CDX98516	Canola	cytosol	84.04	84.67
Bra027293.1-P	Field mustard	cytosol	87.02	84.59
CDX82457	Canola	cytosol	69.57	84.5
HORVU5Hr1G055350.3	Barley	cytosol	87.13	84.26
TraesCS5A01G181800.1	Wheat	cytosol, golgi	87.13	84.26
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	87.02	84.16
CDY45929	Canola	cytosol	75.0	84.13
TraesCS5D01G186200.1	Wheat	cytosol	86.91	84.05
CDX97618	Canola	cytosol	69.04	83.63
PGSC0003DMT400032245	Potato	cytosol	85.74	83.61
Solyc07g062530.2.1	Tomato	cytosol, nucleus, plastid	84.57	82.47
GSMUA_Achr1P20720_001	Banana	cytosol	32.77	27.21

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0008964	GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSMUA_Achr6G26850_001	EnsemblPlants:GSMUA_Achr6P26850_001
EnsemblPlants:GSMUA_Achr6T26850_001	UniProt:M0TAI0	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS
InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523
PANTHER:PTHR30523:SF23	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI000296B7AA	SEG:seg	:

Description

Phosphoenolpyruvate carboxylase, housekeeping isozyme [Source:GMGC_GENE;Acc:GSMUA_Achr6G26850_001]

Coordinates

chr6:+:27483461..27489985

Molecular Weight (calculated)

107633.0 Da

IEP (calculated)

6.030

GRAVY (calculated)

-0.422

Length

940 amino acids

Sequence
(BLAST)

001: MSRLEKMASI DAHMRLLAPG KVSEDDKLIE YDALLLDRFL DILQDLHGEE IRETVQELYE LSAEYEGNHE PEKLEELGNV LTSLDPGDTI VVSKSFSHML
101: NLANLAEEVQ IAYRRRIKLK KGDFADENSA ITESDIEETL KRLVTQLKKS KEEVFDALKN QTIDLVFTAH PTQSVRRSLL QKHGRIRNCL TQLYAKDITP
201: DDKQELDESL QREIQAAFRT DEIRRTPPTP QDEMRAGMSY FHETIWKGVP KFLRRVDTAL KNIGINERVP YNAPLIQFSS WMGGDRDGNP RVTPEVTRDV
301: CLLARMMAAN LYYSQIEDLM FELSMWRCNA ELRIRADVLD RSSKKDAKHY IEFWKQVPPN EPYRVILSDV RDKLYNTRER SRHLLSNGYS DIPEEATFTN
401: IEQFLEPLEL CYRSLCDSGD RPIADGSLLD FLRQVSTFGL SLVRLDIRQE SDRHTDVVDA ITKHLGIGSY RDWPEKQRQE WLLSELNGKR PLFGPDLPKT
501: DEVADVLDTF HVIAELPSDN FGAYIISMAT APSDVLAVEL LQRECHVKEP LRVVPLFEKL ADLEAAPAAL SRLFSIEWYR NRINGKQEVM IGYSDSGKDA
601: GRFSAAWQLY KAQEELIKVA KDYGVKLTMF HGRGGTVGRG GGPTHLAILS QPPDTIHGSL RVTVQGEVIE QSFGEEHLCF RTLQRFTAAT LEHGMHPPIS
701: PKPEWRALMD EMAVVATKEY RSIVFQEPRF VEYFRLATPE LEYGRMNIGS RPSKRKPSGG IESLRAIPWI FAWTQTRFHL PVWLGFGAAF KHVIQKDIKN
801: LHTLQEMYNE WPFFRVTIDL VEMVFAKGDP GIAALYDKLL VSQDLWKFGE QLRANYEETK HLLLQVAGHK DLLEGDPYLK QRLRLRDAYI TTLNACQAYT
901: LKRIRDPSYH LNPSSEYAPG LEDTLILTMK GIAAGLQNTG

Best Arabidopsis Sequence Match ( AT3G14940.2 )
(BLAST)

001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG

Arabidopsis Description

PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.