Factsheet for Solyc07g062530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976
plastid: 26371478

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032245	Potato	cytosol	96.16	96.16
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	87.45	87.36
VIT_19s0014g01390.t01	Wine grape	cytosol	86.1	86.19
Solyc10g007290.2.1	Tomato	cytosol, plastid	86.0	86.0
GSMUA_Achr4P08030_001	Banana	cytosol	82.47	84.94
GSMUA_Achr6P26850_001	Banana	cytosol	82.47	84.57
CDX98516	Canola	cytosol	81.43	84.14
CDX75798	Canola	cytosol	62.14	84.13
AT3G14940.1	Thale cress	cytosol	84.34	83.99
Bra001575.1-P	Field mustard	cytosol	84.02	83.76
KRH26228	Soybean	nucleus	84.02	83.76
Bra027293.1-P	Field mustard	cytosol	83.92	83.66
KRH55092	Soybean	nucleus	83.92	83.66
CDX82457	Canola	cytosol	67.12	83.59
AT1G53310.3	Thale cress	cytosol	83.71	83.45
CDY02513	Canola	cytosol	83.4	83.4
Bra030945.1-P	Field mustard	cytosol	83.4	83.4
CDX97618	Canola	cytosol	67.01	83.25
Solyc07g055060.2.1	Tomato	nucleus	82.99	82.99
KRH27345	Soybean	endoplasmic reticulum	83.19	82.94
EES13699	Sorghum	cytosol	82.88	82.88
KRH21974	Soybean	cytosol	82.99	82.73
CDY25721	Canola	cytosol	76.14	82.38
EER98700	Sorghum	cytosol	82.57	82.32
Os08t0366000-01	Rice	cytosol, plasma membrane	82.05	82.05
CDY45929	Canola	cytosol	71.06	81.74
Os01t0758300-01	Rice	cytosol, plasma membrane	78.22	81.6
KXG33409	Sorghum	cytosol	81.54	81.37
Zm00001d020057_P004	Maize	cytosol, extracellular	82.37	81.19
GSMUA_Achr6P14490_001	Banana	cytosol	79.05	81.15
Zm00001d012702_P008	Maize	cytosol	81.12	80.95
TraesCS3D01G295200.1	Wheat	cytosol	80.81	80.64
HORVU3Hr1G073020.2	Barley	cytosol	80.81	80.64
TraesCS3A01G306700.1	Wheat	cytosol	80.71	80.54
TraesCS3B01G329800.1	Wheat	cytosol, golgi	80.71	80.54
HORVU5Hr1G055350.3	Barley	cytosol	80.91	80.25
TraesCS5A01G181800.1	Wheat	cytosol, golgi	80.81	80.14
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	80.81	80.14
GSMUA_Achr10P...	Banana	cytosol	78.01	80.09
TraesCS5D01G186200.1	Wheat	cytosol	80.71	80.04
GSMUA_Achr9P06420_001	Banana	cytosol	78.01	77.61
Solyc04g006970.2.1	Tomato	plastid	33.71	30.95

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006091	GO:GO:0006099	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015977	GO:GO:0016829	GO:GO:0048046	GO:GO:0048366	UniProt:K4CGT6	HAMAP:MF_00595
InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150
ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF11	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621
EnsemblPlantsGene:Solyc07g062530.2	EnsemblPlants:Solyc07g062530.2.1	UniParc:UPI000276B83B	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:65227490..65233583

Molecular Weight (calculated)

110368.0 Da

IEP (calculated)

5.873

GRAVY (calculated)

-0.427

Length

964 amino acids

Sequence
(BLAST)

001: MATRNLEKFA SIDAQMRLLV PTKVSEDDML VEYDALLLDR FLDILEDLHG EGIKTTVQEC YELSAEYENT HDKKKLEELG SVLTTLDPGD SIVVAKSISH
101: MLNMANLAEE VQIANSGRAK SKKGELSDES NLMTESDIEE TLKRLVVNLN KSPREVFNAL KNQTVDLVFT AHPTQAIRRS LLQKHARIRN CLSQLYAKDI
201: TPDDKEELDE ALEREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWNG VPKFLRRVDT ALKNIGIDER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYYSQIDD LMFELSMWRC NDELRDRADE LHRSLKRDEK HYIEFWKQVP PSEPYRVIIG DVRDKLYHTR ERTRQLLSNG FSEIPEEATY
401: TNIKQFLEPL ELCYRSLCAC GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTDVL DAITQHLEIG SYREWSEERK QEWLLSELSG KRPLFGPDLP
501: KTEEIDDVLN TFHVISELPS DCFGAYIISM ATAPSDVLAV ELLQRECHVK QPLRVVPLFE KLDDLDAAPA AIARLFSIEW YKNRINGKQE VMIGYSDSGK
601: DAGRLSAAWQ LYKAQEELIK VAKQYDVKLI MFHGRGGTVG RGGGPSHLAI LSQPPDTIQG SLRVTVQGEV IEQSFGEEHL CFRTLQRFTS ATLEHGMYPP
701: FPPKPEWRAL LDEISVVATE KYRSIVFKEP RFVEYFRLAT PELEYGRMNI GSRPSKRKRN GGIETLRAIP WIFAWTQTRF HLPVWLGFGA AFKYALNKDK
801: KNLNMLRDMH KKWPFFRVTA DLIEMVFAKG DPGIAALYDK LLVSEDLWSF GELLRSDYEE TKSLLLKVAG HKELLENDPS LKQRLRLRDS YITTLNVCQA
901: YTLKRIRDPT YKVTPRPHIT KEYIESKPAA ELVSLNPQSE YAPGLEDTLI LTMKGIAAGM QNTG

Best Arabidopsis Sequence Match ( AT3G14940.2 )
(BLAST)

001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG

Arabidopsis Description

PPC3Phosphoenolpyruvate carboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q84VW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.