Factsheet for GSMUA_Achr9P06420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26850_001	Banana	cytosol	86.69	89.36
GSMUA_Achr4P08030_001	Banana	cytosol	84.62	87.61
CDX75798	Canola	cytosol	63.47	86.38
VIT_19s0014g01390.t01	Wine grape	cytosol	83.38	83.9
VIT_12s0028g02180.t01	Wine grape	cytosol	82.97	83.32
EER98700	Sorghum	cytosol	81.84	82.01
KRH55092	Soybean	nucleus	81.63	81.8
EES13699	Sorghum	cytosol	81.32	81.74
KRH26228	Soybean	nucleus	81.53	81.7
Os08t0366000-01	Rice	cytosol, plasma membrane	81.11	81.54
KXG33409	Sorghum	cytosol	81.11	81.37
AT3G14940.1	Thale cress	cytosol	81.11	81.2
KRH27345	Soybean	endoplasmic reticulum	80.91	81.08
Os01t0758300-01	Rice	cytosol, plasma membrane	77.3	81.06
Zm00001d012702_P008	Maize	cytosol	80.81	81.06
CDY02513	Canola	cytosol	80.6	81.02
Bra030945.1-P	Field mustard	cytosol	80.6	81.02
AT1G53310.3	Thale cress	cytosol	80.7	80.87
KRH21974	Soybean	cytosol	80.7	80.87
CDX98516	Canola	cytosol	77.81	80.81
Bra001575.1-P	Field mustard	cytosol	80.6	80.77
GSMUA_Achr6P14490_001	Banana	cytosol	78.22	80.72
PGSC0003DMT400054791	Potato	cytosol	80.29	80.71
CDY25721	Canola	cytosol	74.2	80.7
PGSC0003DMT400039809	Potato	cytosol	80.29	80.62
Solyc10g007290.2.1	Tomato	cytosol, plastid	80.19	80.6
GSMUA_Achr10P...	Banana	cytosol	78.02	80.51
Zm00001d020057_P004	Maize	cytosol, extracellular	81.22	80.47
Bra027293.1-P	Field mustard	cytosol	80.19	80.35
TraesCS3B01G329800.1	Wheat	cytosol, golgi	79.98	80.23
HORVU3Hr1G073020.2	Barley	cytosol	79.77	80.02
TraesCS3A01G306700.1	Wheat	cytosol	79.67	79.92
Solyc12g014250.1.1	Tomato	cytosol, nucleus, plastid, unclear	79.57	79.9
TraesCS3D01G295200.1	Wheat	cytosol	79.57	79.81
TraesCS5A01G181800.1	Wheat	cytosol, golgi	79.67	79.42
HORVU5Hr1G055350.3	Barley	cytosol	79.67	79.42
TraesCS5B01G179800.1	Wheat	cytosol, extracellular, golgi, unclear	79.57	79.32
CDY45929	Canola	cytosol	68.52	79.24
TraesCS5D01G186200.1	Wheat	cytosol	79.46	79.22
CDX82457	Canola	cytosol	63.16	79.07
PGSC0003DMT400032245	Potato	cytosol	78.43	78.84
CDX97618	Canola	cytosol	62.95	78.61
Solyc07g062530.2.1	Tomato	cytosol, nucleus, plastid	77.61	78.01
GSMUA_Achr1P20720_001	Banana	cytosol	29.93	25.62

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0008964	GO:GO:0009987	GO:GO:0015977	EnsemblPlantsGene:GSMUA_Achr9G06420_001	EnsemblPlants:GSMUA_Achr9P06420_001
EnsemblPlants:GSMUA_Achr9T06420_001	UniProt:M0TY01	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	PFAM:PF00311
PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF23	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
SUPFAM:SSF51621	UniParc:UPI000295BC2B	SEG:seg	:	:	:

Description

Phosphoenolpyruvate carboxylase, housekeeping isozyme [Source:GMGC_GENE;Acc:GSMUA_Achr9G06420_001]

Coordinates

chr9:+:4095787..4103233

Molecular Weight (calculated)

110361.0 Da

IEP (calculated)

6.725

GRAVY (calculated)

-0.374

Length

969 amino acids

Sequence
(BLAST)

001: MSRVEKMASI DAHMRLLAPG KVSEDDKLVE YDALLLDRFL DILQDLHGDD IRETVQDLYE LSAEYEGKHD PEKLVELGNV LTSLDAGDTI VVTKSFSHML
101: NLANLAEEVQ IAYRRRIKLK KGDFADENSA ITESDIEETL KRLVMQLKKS KEEVFDALKN QTVDLVLTAH PTQSVRRSLL QKHARIRTCL TQLYAKDITP
201: DDKQELDEAL QREIQAAFRT DEIRRTPPTP QDEMRAGMSY FHETIWKGVP KFLRRVDTAL KNIGINERVP YNAPLIQFSS WMGGDRDGNP RVTPEVTRDV
301: CLLARMMAAN LYYSQIEDLM FELSMWRCNT ELQVRADELH RSSKKDAKHY IVRKGKIMVK HERGICAMQV QGPFEASTQT SEKLMSFRFS LLLIILTSEL
401: NDSRCKGMMS RRGGRSWIYH EARLIGKPKF WKQVPSSEPY RVILSGVRDK LYNTRERSRH LLSNGYSDIP EEATFTDVEE FLEPLELCYR SLCDCGDRPI
501: ADGSLLDFLR QVSTFGLSLV RLDIRQESDR HTDVIDAITK HLGIGSYRDW PEEQRQEWLL SELNGKRPLF GPDLPKTDEI SDVLDTLHVI AELPSDNFGA
601: YIISMATAPS DVLAVELLQR ECHVKKPLRV VPLFEKLADL EAAPAALARL FSIDWYKNRI CGKQEVMIGY SDSGKDAGRF SAAWQLYKAQ EELIKVAKDY
701: GVKLMMFHGR GGTVGRGGGP THLAILSQPP DTVHGSLRVT VQGEVIEQSF GEEHLCFRTL QRFTAATLEH GMHPPISPKP EWRALMDEMA VVATEEYRSI
801: VFREPRFVEY FRLATPELEY GRMNIGSRPS KRKPSGGIES LRAIPWIFAW TQTRVTIDLV EMVFAKGDPG IAALYDKLLV SQDLFLIPFN KRLRVAGHKD
901: LLEGDPYLKQ RLRLRDAYIT TLNACQAYTL KRIRDPSYHL NPSSEYAPGL EDTLILTMKG IAAGLQNTG

Best Arabidopsis Sequence Match ( AT1G53310.3 )
(BLAST)

001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG

Arabidopsis Description

PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.