Factsheet for VIT_01s0011g02740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019322	Potato	cytosol	78.32	79.14
Bra024730.1-P	Field mustard	cytosol	79.36	76.62
Bra004016.1-P	Field mustard	cytosol	74.36	76.01
Solyc04g006970.2.1	Tomato	plastid	75.12	75.9
AT1G68750.1	Thale cress	cytosol	72.86	74.9
Os01t0110700-01	Rice	cytosol	72.95	74.78
EES00444	Sorghum	cytosol	72.67	74.28
Zm00001d040129_P001	Maize	cytosol	72.29	74.18
TraesCS3B01G011200.1	Wheat	cytosol	67.58	73.99
TraesCS3D01G005000.1	Wheat	cytosol	72.38	73.28
TraesCS3B01G008500.1	Wheat	cytosol	72.2	73.23
HORVU3Hr1G000940.2	Barley	cytosol	72.01	72.9
KRH70911	Soybean	cytosol	23.28	68.99
KRH70922	Soybean	cytosol	25.73	68.25
GSMUA_Achr1P20720_001	Banana	cytosol	69.93	65.55
CDY28081	Canola	cytosol	27.43	58.55
KRH70915	Soybean	cytosol	33.84	52.79
KRH70920	Soybean	cytosol	23.75	49.61
KRH70912	Soybean	cytosol, golgi, nucleus	16.31	43.14
KRH70917	Soybean	cytosol	34.5	37.27
VIT_19s0014g01390.t01	Wine grape	cytosol	30.73	33.85
VIT_12s0028g02180.t01	Wine grape	cytosol	30.07	33.06
VIT_19s0015g00410.t01	Wine grape	cytosol	2.45	31.71

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
EntrezGene:100247335	wikigene:100247335	EMBL:AM424873	ProteinID:CAN62388	ProteinID:CAN62388.1	ProteinID:CCB50961
ProteinID:CCB50961.1	ncoils:Coil	UniProt:F6HFQ3	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006091
GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964	GO:GO:0009987	GO:GO:0015977
EntrezGene:LOC100247335	wikigene:LOC100247335	HAMAP:MF_00595	InterPro:PEPCASE_His_AS	InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS
InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393	ScanProsite:PS00781	PANTHER:PTHR30523
PANTHER:PTHR30523:SF6	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	UniParc:UPI000198286C	ArrayExpress:VIT_01s0011g02740	EnsemblPlantsGene:VIT_01s0011g02740
EnsemblPlants:VIT_01s0011g02740.t01	unigene:Vvi.14725	RefSeq:XP_002280842	RefSeq:XP_002280842.1	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:2445526..2456145

Molecular Weight (calculated)

119258.0 Da

IEP (calculated)

6.721

GRAVY (calculated)

-0.387

Length

1061 amino acids

Sequence
(BLAST)

0001: MTDTTDDIAE EISFQSFDDD CRLLGSLLNE VLQREVGSNF MEKVERNRIL AQSACNMRAS GIEDTAELLE KQLISEISQM NLEEALTLAR AFSHYLNLMG
0101: IAETHHRLRK ARNVAHMSKS CDDIFNQLLQ GGVSPEELYN TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLDYNDRP NLGHEDREML IEDLVREITS
0201: IWQTDELRRQ KPTVVDEARA GLNIVEQSLW RAVPHYLRRV SNALKKHTGK SLPLTCTPIK FGSWMGGDRD GNPNVTAEVT RDVSLLSRWM AIDLYIREVD
0301: SLRFELSMNR CSDSLSRLAH EILEKETSSV DRNESRNQPL NRSQLKPYSQ LGPTLPRQLP AGADLPSCTE CKDGESKYPK LEFPGTDYMP LNRQDVKAAS
0401: SSDTSFQDSN KDFGKTYGNG TVANSSNSQS AATPRTVSFS SGQLLSQRKL FSESQLGRSS FQKLLEPSLP QRPGIAPYRI VLGNVKDKLM KTQRRLELLL
0501: EDLPCEHDPG DYYETADELL EPLLLCHESM QSCGSGILAD GRLADLIRRV ATFRMVLMKL DLRQESARHA ETLDAITSYL DMGIYSEWDE ERKLDFLTRE
0601: LKGKRPLVPP TIEVVADVKE VLDTFRVAAE IGSDSFGAYV ISMASNASDV LAVELLQKDA RLAVCGELGR PCSGGTLRVV PLFETVKDLR GAGAVIRKLL
0701: SIDWYREHII KNHNGHQEVM VGYSDSGKDA GRFTAAWELY KAQEDVVAAC NEYGIKVTLF HGRGGSIGRG GGPTYLAIQS QPPGSVMGTL RSTEQGEMVQ
0801: AKFGLPHTAV RQLEIYTTAV LLATMRPPLP PREEKWRNLM EEISKISGQC YRSTVYENPE FLAYFHEATP QAELGFLNIG SRPTRRKSST GIGHLRAIPW
0901: VFAWTQTRFV LPAWLGVGSG LKGVCEKGHK EDLIAMYKEW PFFQSTIDLI EMVLGKADIT IAKHYDEVLV SPSRQELGAD LRRELLTTGK FVLVVTGHDK
1001: LSQNNRSLRR LIESRLPFLN PMNMLQVEIL RRLRRDDDNN KLRDALLITI NGIAAGMRNT G

Best Arabidopsis Sequence Match ( AT1G68750.1 )
(BLAST)

0001: MTDTTDDIAE EISFQSFEDD CKLLGSLFHD VLQREVGNPF MEKVERIRIL AQSALNLRMA GIEDTANLLE KQLTSEISKM PLEEALTLAR TFTHSLNLMG
0101: IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
0201: LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
0401: SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
0501: LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
0601: ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
0701: AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
0801: PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
0901: ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1001: LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG

Arabidopsis Description

PPC4PPC4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7Q9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.