CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70920	Soybean	cytosol	77.56	61.22
KRH70922	Soybean	cytosol	48.38	48.5
KRH70911	Soybean	cytosol	35.16	39.39
KRH70915	Soybean	cytosol	59.6	35.15
CDY28081	Canola	cytosol	26.43	21.33
KRH70917	Soybean	cytosol	47.38	19.35
KRH71121	Soybean	cytosol	48.38	18.39
KRH75540	Soybean	cytosol	46.88	17.8
KRH34779	Soybean	cytosol	44.89	17.44
TraesCS3B01G011200.1	Wheat	cytosol	40.9	16.92
VIT_01s0011g02740.t01	Wine grape	cytosol	43.14	16.31
PGSC0003DMT400019322	Potato	cytosol	42.64	16.29
Solyc04g006970.2.1	Tomato	plastid	41.9	16.0
Os01t0110700-01	Rice	cytosol	40.65	15.75
Bra004016.1-P	Field mustard	cytosol	40.65	15.7
TraesCS3B01G008500.1	Wheat	cytosol	40.9	15.68
Zm00001d040129_P001	Maize	cytosol	40.4	15.67
TraesCS3D01G005000.1	Wheat	cytosol	40.9	15.65
HORVU3Hr1G000940.2	Barley	cytosol	40.4	15.46
EES00444	Sorghum	cytosol	39.9	15.41
AT1G68750.1	Thale cress	cytosol	39.15	15.21
Bra024730.1-P	Field mustard	cytosol	41.65	15.2
GSMUA_Achr1P20720_001	Banana	cytosol	40.65	14.4
KRH55092	Soybean	nucleus	25.69	10.65
KRH26228	Soybean	nucleus	25.69	10.65
KRH55745	Soybean	cytosol, endoplasmic reticulum, nucleus	25.44	10.56
KRH27345	Soybean	endoplasmic reticulum	25.19	10.44
KRH27044	Soybean	nucleus	24.94	10.35
KRH21974	Soybean	cytosol	24.94	10.34
KRH22285	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	24.69	10.12
KRH71124	Soybean	cytosol	7.48	3.85

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:35.1
UniProt:A0A0R0KVX6	EMBL:ACUP02000823	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G117600	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008964
GO:GO:0009987	GO:GO:0015977	GO:GO:0016020	GO:GO:0016021	EnsemblPlants:KRH70912	ProteinID:KRH70912
ProteinID:KRH70912.1	ProteinID:KRH70913.1	InterPro:PEP_COase	PFAM:PF00311	PANTHER:PTHR30523	PANTHER:PTHR30523:SF6
MetaCyc:PWY-1622	MetaCyc:PWY-241	MetaCyc:PWY-5913	MetaCyc:PWY-6142	MetaCyc:PWY-6146	MetaCyc:PWY-6549
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7124	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	TMHMM:TMhelix
UniParc:UPI0006ED9B74	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:11490830..11497098

Molecular Weight (calculated)

46297.4 Da

IEP (calculated)

8.288

GRAVY (calculated)

-0.515

Length

401 amino acids

Sequence
(BLAST)

001: MGGDRDGNPN VTAKVTKDVS LLSRWMAIDL YIREVDGLRF ELSMNQCGDK LSELAHEILK DYHVNLMVLL KPLILPCNIL NDDIMLYLFI LEALVIHLIP
101: LWSSFMHYFL YEVLGGETSS STESNGGSQN VRLSIPILPN SSSSLVSMTY SPSFNSSQLV AQRKLFAESQ IGRTSFQRLL EPNSDSYRHG PSKHDPMDYY
201: ETKYQLLEPL LLCYESLQLC GSGVLADGRL ADLIRRVATF GMVLMKLDLR QESSRHAETI DAITRYLDMG TYSEWDEEKK LDFLTRELKG KRPLVPPSIE
301: SFQGVVDFLA QELFNQNASI ILHTYMITLQ KKMREKERER GRETERGRER RRVTDRDRRN ERWSETDTAR TSVKQYRNTA RTSTNRRTPN GSPSRRWRSM
401: D

Best Arabidopsis Sequence Match ( AT1G68750.1 )
(BLAST)

0001: MTDTTDDIAE EISFQSFEDD CKLLGSLFHD VLQREVGNPF MEKVERIRIL AQSALNLRMA GIEDTANLLE KQLTSEISKM PLEEALTLAR TFTHSLNLMG
0101: IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
0201: LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
0301: SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
0401: SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
0501: LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
0601: ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
0701: AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
0801: PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
0901: ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1001: LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG

Arabidopsis Description

PPC4PPC4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7Q9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.