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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
cytosol: 22313117
extracellular: 22313117
msms PMID: 22313117 doi
S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto
Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g055060.2.1 Tomato nucleus 98.96 98.24
KRH55745 Soybean cytosol, endoplasmic reticulum, nucleus 89.45 88.61
KRH27044 Soybean nucleus 89.45 88.61
KRH22285 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 89.03 87.12
AT1G53310.3 Thale cress cytosol 87.36 86.45
PGSC0003DMT400039809 Potato cytosol 87.15 86.42
Bra030945.1-P Field mustard cytosol 87.04 86.41
CDY02513 Canola cytosol 87.04 86.41
CDY25721 Canola cytosol 80.36 86.31
CDX75798 Canola cytosol 63.85 85.81
PGSC0003DMT400054791 Potato cytosol 86.21 85.58
Bra001575.1-P Field mustard cytosol 86.42 85.52
AT3G14940.1 Thale cress cytosol 86.42 85.43
CDX98516 Canola cytosol 83.28 85.42
CDX82457 Canola cytosol 69.07 85.4
CDY45929 Canola cytosol 74.61 85.2
Bra027293.1-P Field mustard cytosol 85.68 84.8
CDX97618 Canola cytosol 68.65 84.66
PGSC0003DMT400032245 Potato cytosol 84.85 84.23
PGSC0003DMT400019322 Potato cytosol 33.86 30.86
Protein Annotations
KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31Gene3D:1.20.1440.90MapMan:1.4.1.1
ProteinID:AFW90631ProteinID:AFW90631.1GO:GO:0003674GO:GO:0003824GO:GO:0006091GO:GO:0006099
GO:GO:0008150GO:GO:0008152GO:GO:0008964GO:GO:0009987GO:GO:0015977EMBL:JX576275
UniProt:M1BTN7HAMAP:MF_00595InterPro:PEPCASE_His_ASInterPro:PEP_COaseInterPro:PEP_COase_Lys_ASInterPro:PEP_COase_bac/pln-type
PFAM:PF00311EnsemblPlantsGene:PGSC0003DMG400020422PGSC:PGSC0003DMG400020422EnsemblPlants:PGSC0003DMT400052608PRINTS:PR00150ScanProsite:PS00393
ScanProsite:PS00781PANTHER:PTHR30523PANTHER:PTHR30523:SF12InterPro:Pyrv/PenolPyrv_Kinase-like_domSUPFAM:SSF51621UniParc:UPI000294D885
SEG:seg:::::
Description
Phosphoenolpyruvate carboxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400020422]
Coordinates
chr7:-:50149929..50157479
Molecular Weight (calculated)
109171.0 Da
IEP (calculated)
6.033
GRAVY (calculated)
-0.393
Length
957 amino acids
Sequence
(BLAST)
001: MASIDAQLRL LAPAKVSEDD KLVEYDALLL DRFLDILQDL HGEDIRETVQ ECYELSAEYE GRHDPHKLEE LGRMLTSLDA GDSIVVTKAF SNMLNLGNLA
101: EEVQIAYRRR SKLKKRDFSD EASALTESDI EETLKKLVGQ LNKSPQEVFD ALKNQTVDLV LTAHPTQSVR RSLLQKHARI RDCMTQLYAK DITPDDKQEL
201: DEALQREIQA AFRTDEIRRT PPTPQDEMRA GMSYFHETIW KGVPKFLRRV DTALKNIGIN ERVPYNAPLI QFSSWMGGDR DGNPRVTPEV TRDVCLLARM
301: MAANLYFSQI EDLMFELSMW RCNDELRVRA EELHRTSKRD AKHYIEFWKK IPPNEPYRVL LADVRDRLYN TQERARQLLA NGFSDVPEES TFTNLEQFLE
401: PLELCYRSLC ACGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDVITRHVG VGSYKEWSEE KRQEWLLSEL SGKRPLFGPD LPKTDEVADV
501: LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECH VKSPLRVVPL FEKLADLESA PAAVARLFSI DWYRNRINGK QEVMIGYSDS GKDAGRLSAA
601: WQLYKAQEEL VKVAKEFGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI HGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMN PPVAPKPEWR
701: ALLDEMSVIA TKEYRSFVFQ DPRFVEYFRL ATPELEYGRM NIGSRPAKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GAAFKHVIEK DIRNLQMLKD
801: MYNGWPFFRV TLDLLEMVFA KGDPGIAALY DKLLVSEDLW PLGERLRSKY EETKGFLLQV AGHKDLLEGD PYLRQRLKLR DSYITTLNVS QAYTLKRIRD
901: PNYNVKVRPH LDKEIMESSK PAAELVKLNP TSEYAPGLED TLILTMKGIA AGMQNTG
Best Arabidopsis Sequence Match ( AT1G53310.3 )
(BLAST)
001: MANRKLEKMA SIDVHLRQLV PGKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YEHSAEYEGK HEPKKLEELG SVLTSLDPGD SIVIAKAFSH
101: MLNLANLAEE VQIAYRRRIK KLKKGDFVDE SSATTESDLE ETFKKLVGDL NKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD EALQREIQAA FRTDEIKRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIEE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AATMYFNQIE DLMFEMSMWR CNDELRARAD EVHANSRKDA AKHYIEFWKS IPTTEPYRVI LGDVRDKLYH TRERAHQLLS NGHSDVPVEA
401: TFINLEQFLE PLELCYRSLC SCGDRPIADG SLLDFLRQVS TFGLSLVRLD IRQESDRHTD VLDAITTHLD IGSYREWSEE RRQEWLLSEL SGKRPLFGSD
501: LPKTEEIADV LDTFHVIAEL PADSFGAYII SMATAPSDVL AVELLQRECR VKQPLRVVPL FEKLADLEAA PAAVARLFSV DWYKNRINGK QEVMIGYSDS
601: GKDAGRLSAA WQLYKAQEEL VKVAKEYGVK LTMFHGRGGT VGRGGGPTHL AILSQPPDTI NGSLRVTVQG EVIEQSFGEE HLCFRTLQRF TAATLEHGMR
701: PPISPKPEWR ALLDEMAVVA TEEYRSVVFQ EPRFVEYFRL ATPELEYGRM NIGSRPSKRK PSGGIESLRA IPWIFAWTQT RFHLPVWLGF GSAIRHVIEK
801: DVRNLHMLQD MYQHWPFFRV TIDLIEMVFA KGDPGIAALY DKLLVSEELW PFGEKLRANF EETKKLILQT AGHKDLLEGD PYLKQRLRLR DSYITTLNVC
901: QAYTLKRIRD PSYHVTLRPH ISKEIAESSK PAKELIELNP TSEYAPGLED TLILTMKGIA AGLQNTG
Arabidopsis Description
PPC1Phosphoenolpyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.