Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G037540.3 | Barley | plastid | 11.11 | 6.26 |
| HORVU2Hr1G012930.6 | Barley | mitochondrion | 11.9 | 4.21 |
| HORVU2Hr1G049310.1 | Barley | mitochondrion | 0.79 | 2.78 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G012920.1 | EnsemblPlantsGene:HORVU2Hr1G012920 | SEG:seg | UniParc:UPI000B48018B | UniProt:A0A287H409 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:+:27990619..27993154
Molecular Weight (calculated)
28532.9 Da
IEP (calculated)
10.273
GRAVY (calculated)
-0.212
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIKYVKLNK GYLSDLEFNA TPKDKKASLV IHGLVDKVIA GVMYILSLRI PPYIRIDFIQ LLLRHTVKKK CVRWTLRVTS VHGMRAPLSF LRSIEVSFPD
101: RSDMKPVVLM EQPFSLQRET SMTSIFSMLL TLNFSDGYGC SSSSVECHVN FQKQKESFVR DRILVLQEMK CTAERQSRAG QQSILERESL PRAETSIHAF
201: VTNIVRYDAE DLKVADPKGN WINSSSSTSN NLTKRLVKGA SGYPAPAKKL KC
101: RSDMKPVVLM EQPFSLQRET SMTSIFSMLL TLNFSDGYGC SSSSVECHVN FQKQKESFVR DRILVLQEMK CTAERQSRAG QQSILERESL PRAETSIHAF
201: VTNIVRYDAE DLKVADPKGN WINSSSSTSN NLTKRLVKGA SGYPAPAKKL KC
001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
Arabidopsis Description
SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.