Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G092700.1 | Wheat | cytosol | 62.41 | 95.7 |
| TraesCS2A01G077800.1 | Wheat | cytosol | 58.06 | 94.09 |
| TraesCS2D01G075800.1 | Wheat | cytosol | 84.57 | 88.94 |
| KXG26572 | Sorghum | cytosol | 52.17 | 78.15 |
| Os04t0271000-01 | Rice | cytosol | 52.73 | 77.85 |
| Zm00001d025705_P008 | Maize | cytosol | 52.03 | 74.2 |
| Solyc07g065550.2.1 | Tomato | cytosol | 39.55 | 59.75 |
| VIT_19s0015g00570.t01 | Wine grape | cytosol | 37.73 | 58.86 |
| PGSC0003DMT400057382 | Potato | cytosol | 35.34 | 58.33 |
| KRH46385 | Soybean | nucleus | 34.78 | 57.27 |
| Bra028961.1-P | Field mustard | cytosol | 37.59 | 57.27 |
| CDY36763 | Canola | cytosol | 37.45 | 57.05 |
| KRG98474 | Soybean | nucleus | 38.29 | 56.99 |
| CDY11980 | Canola | cytosol | 37.31 | 56.84 |
| AT5G55760.1 | Thale cress | cytosol, nucleus, peroxisome | 37.59 | 56.66 |
| GSMUA_Achr8P24470_001 | Banana | cytosol | 41.94 | 55.68 |
| HORVU2Hr1G049310.1 | Barley | mitochondrion | 1.96 | 19.44 |
| HORVU5Hr1G037540.3 | Barley | plastid | 11.36 | 18.12 |
| HORVU2Hr1G012920.1 | Barley | cytosol, nucleus, plasma membrane | 4.21 | 11.9 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G012930.6 | EnsemblPlantsGene:HORVU2Hr1G012930 | Gene3D:2.20.28.200 | Gene3D:3.40.50.1220 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0070403 | InterPro:DHS-like_NAD/FAD-binding_dom | InterPro:IPR026590 | InterPro:Sirtuin | InterPro:Ssirtuin_cat_dom |
| ncoils:Coil | PANTHER:PTHR11085 | PANTHER:PTHR11085:SF20 | PFAM:PF02146 | PFscan:PS50305 | SEG:seg |
| SUPFAM:SSF52467 | UniParc:UPI000B476FA3 | UniProt:A0A287H423 | MapMan:12.3.2.3 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:28055958..28065128
Molecular Weight (calculated)
78912.3 Da
IEP (calculated)
9.791
GRAVY (calculated)
-0.353
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: YRTLRCRGRL DLRSALDSPI WSPSSCSRIP PSGRRTGWPS SPRTSLLSSL AGSSWPTSPT PASGPTLRPS RVLDARNRKL AKDKAALKAV LADLDAVRAQ
101: EREVAEANSK LEAAILRKKR EAALESRRRP LGNFKEVTFL LGGSVRRHES CVEEADEREM SDLDGTDLYV PDCVWERRGG GGMECDGVRR FTMAARRNAA
201: VAGEVRRRAA FAVLEEMGPA QLGQGEGSNK TATGLEKLKK SREMSLGYAE KLSYREDVGT VGMPEKFDSP KLLQGKIEEL AVMVQKSKHL VVFTGAGIST
301: SSGIPDFRGP KGVWTMQRAG KGVPDASLPF HRAAPTLTHM ALVELERAGL LKFVISQNVD SLHLRSGFPR EKLSELHGNS FKEVCPCCKT EYLRDFEIET
401: IGLKDTPRRC ADKNCGARLK DTVLDWEDAL PPEEMYSAEE QCRTADLVLC LGTSLQITPA CNMPLLSIKN GGKVAIVNLQ ATPKDKKASL VIHGLVDKVI
501: AGVMYILSLR IPPYIRIDFI QLLLRHTVKK KCVRWTLRVT SVHGMRAPLS FLRSIEVSFP DRSDMKPVVL MEQPFSLQRE TSMTSIFSML LTLNFSDGYG
601: CSSSSVECHV NFQKQKESFV RDRILVLQEM KCTAERQSRA GQQSILERES LPRAETSIHA FVTNIVRYDA EDLKVADPKG NWINSSSSTS NNLTKRLVKG
701: ASGYPAPAKK LKC
101: EREVAEANSK LEAAILRKKR EAALESRRRP LGNFKEVTFL LGGSVRRHES CVEEADEREM SDLDGTDLYV PDCVWERRGG GGMECDGVRR FTMAARRNAA
201: VAGEVRRRAA FAVLEEMGPA QLGQGEGSNK TATGLEKLKK SREMSLGYAE KLSYREDVGT VGMPEKFDSP KLLQGKIEEL AVMVQKSKHL VVFTGAGIST
301: SSGIPDFRGP KGVWTMQRAG KGVPDASLPF HRAAPTLTHM ALVELERAGL LKFVISQNVD SLHLRSGFPR EKLSELHGNS FKEVCPCCKT EYLRDFEIET
401: IGLKDTPRRC ADKNCGARLK DTVLDWEDAL PPEEMYSAEE QCRTADLVLC LGTSLQITPA CNMPLLSIKN GGKVAIVNLQ ATPKDKKASL VIHGLVDKVI
501: AGVMYILSLR IPPYIRIDFI QLLLRHTVKK KCVRWTLRVT SVHGMRAPLS FLRSIEVSFP DRSDMKPVVL MEQPFSLQRE TSMTSIFSML LTLNFSDGYG
601: CSSSSVECHV NFQKQKESFV RDRILVLQEM KCTAERQSRA GQQSILERES LPRAETSIHA FVTNIVRYDA EDLKVADPKG NWINSSSSTS NNLTKRLVKG
701: ASGYPAPAKK LKC
001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
Arabidopsis Description
SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.