Factsheet for TraesCS2B01G092700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G077800.1	Wheat	cytosol	91.4	96.59
KXG26572	Sorghum	cytosol	81.08	79.2
Os04t0271000-01	Rice	cytosol	80.86	77.85
Zm00001d025705_P008	Maize	cytosol	80.65	75.0
TraesCS2D01G075800.1	Wheat	cytosol	98.71	67.7
HORVU2Hr1G012930.6	Barley	mitochondrion	95.7	62.41
VIT_19s0015g00570.t01	Wine grape	cytosol	59.14	60.18
Solyc07g065550.2.1	Tomato	cytosol	61.08	60.17
PGSC0003DMT400057382	Potato	cytosol	54.62	58.8
KRH46385	Soybean	nucleus	54.19	58.2
KRG98474	Soybean	nucleus	59.57	57.83
Bra028961.1-P	Field mustard	cytosol	57.85	57.48
CDY36763	Canola	cytosol	57.63	57.27
CDY11980	Canola	cytosol	57.42	57.05
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	57.63	56.66
GSMUA_Achr8P24470_001	Banana	cytosol	64.52	55.87

Protein Annotations

EnsemblPlants:TraesCS2B01G092700.1	EnsemblPlantsGene:TraesCS2B01G092700	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0070403	InterPro:DHS-like_NAD/FAD-binding_dom	InterPro:IPR026590	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
ncoils:Coil	PANTHER:PTHR11085	PANTHER:PTHR11085:SF20	PFAM:PF02146	PFscan:PS50305	SEG:seg
SUPFAM:SSF52467	TIGR:cd01410	MapMan:12.3.2.3	:	:	:

Description

No Description!

Coordinates

chr2B:-:53464913..53472660

Molecular Weight (calculated)

51531.7 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.189

Length

465 amino acids

Sequence
(BLAST)

001: MSLGYAEKLS YREDVGTVGM PEKFDSPKLL QGKIEELAVM VQKSKHLVVF TGAGISTSSG IPDFRGPKGV WTLQRAGKGV PDASLPFHRA APTLTHMALV
101: ELERAGLLKF VISQNVDSLH LRSGFPREKL AELHGNSFKE VCPCCKTEYL RDFEIETIGL KDTPRRCTDK NCGARLKDTV LDWEDALPPE EMNSAEEQCR
201: AADLVLCLGT SLQITPACNM PLLSIKNGGK VAIVNLQATP KDKKASLVIH GLVDKVIAGV MCILSLRIPP YIRTDFIQLL LRHTVKKKCV RWTMRVTSVH
301: GMRAPLSFLR SIEVSFPDRS DMKPVVLMEQ PFSLQRETSM TSIFSMLLTL NFSDGCGCSS SSIECHVNFQ KQKESFVRDR ILVLQEMKCT AERQSRAGQQ
401: SILERESLPR AETSIHAFVT NIIRYDAEDP KGSWMNSGSS TSSNLAKRLV EGASGYSAST KKLKC

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.