Factsheet for Solyc07g065550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057382	Potato	cytosol	90.89	99.31
VIT_19s0015g00570.t01	Wine grape	cytosol	70.13	72.43
KRH46385	Soybean	nucleus	64.19	69.98
KRG98474	Soybean	nucleus	70.34	69.31
CDY36763	Canola	cytosol	68.01	68.59
Bra028961.1-P	Field mustard	cytosol	67.8	68.38
CDY11980	Canola	cytosol	67.58	68.16
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	68.22	68.08
TraesCS2B01G092700.1	Wheat	cytosol	60.17	61.08
KXG26572	Sorghum	cytosol	60.59	60.08
TraesCS2A01G077800.1	Wheat	cytosol	55.08	59.09
Os04t0271000-01	Rice	cytosol	60.17	58.8
Zm00001d025705_P008	Maize	cytosol	60.17	56.8
GSMUA_Achr8P24470_001	Banana	cytosol	59.96	52.7
TraesCS2D01G075800.1	Wheat	cytosol	60.38	42.04
HORVU2Hr1G012930.6	Barley	mitochondrion	59.75	39.55
Solyc04g009430.2.1	Tomato	mitochondrion	16.74	20.52

Protein Annotations

EnsemblPlants:Solyc07g065550.2.1	EnsemblPlantsGene:Solyc07g065550.2	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0070403	InterPro:DHS-like_NAD/FAD-binding_dom	InterPro:IPR026590	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
PANTHER:PTHR11085	PANTHER:PTHR11085:SF20	PFAM:PF02146	PFscan:PS50305	SUPFAM:SSF52467	UniParc:UPI000276AC5F
UniProt:K4CHN3	MapMan:12.3.2.3	:	:	:	:

Description

NAD-dependent protein deacetylase SRT1 [Source:Projected from Arabidopsis thaliana (AT5G55760) UniProtKB/Swiss-Prot;Acc:Q9FE17]

Coordinates

chr7:+:67262652..67273179

Molecular Weight (calculated)

52504.4 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.132

Length

472 amino acids

Sequence
(BLAST)

001: MSLGYAEKLS FIEDVGNVGM TEYFDPPLLL QDKIERLAVM IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKAL PEASLPFHRA TPSMTHMALV
101: ELEKAGFLKF LISQNIDGLH LRSGIPREKL SELHGDSFME RCPSCGIEYM RDFEIETIGL KETARRCSKV GCGARLKDTV LDWEDALPPK EMNPAERHCK
201: MADVVLCLGT SLQITPACNL PLKSLKGGGK IVIVNLQKTP KDKKASLLIH GLVDKVITGV MEFLSLRIPP FIRIDLLQTI FTQASSLDEK YVNWSLAVAS
301: VHGNRAPLPF IKSVEVSFSE SQNMKAAVLD KQPLYLKRRT VKSTNPFNIM MKLNFSDGCK CSSAEIMIPI DFKISADVFK DDKDSILQNL RESALTDPSC
401: GQTSVIEKKV IMVPKSEVIV HAIVTNIVKF DRSYDGDLSN GSFKRKYECL NGVIPSRKRS NGRKPRTVIN VR

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.