Factsheet for TraesCS2A01G077800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G092700.1	Wheat	cytosol	96.59	91.4
KXG26572	Sorghum	cytosol	79.77	73.74
Os04t0271000-01	Rice	cytosol	80.0	72.88
Zm00001d025705_P008	Maize	cytosol	79.55	70.0
TraesCS2D01G075800.1	Wheat	cytosol	98.18	63.72
PGSC0003DMT400057382	Potato	cytosol	57.95	59.03
KRH46385	Soybean	nucleus	57.95	58.89
HORVU2Hr1G012930.6	Barley	mitochondrion	94.09	58.06
VIT_19s0015g00570.t01	Wine grape	cytosol	58.18	56.02
Solyc07g065550.2.1	Tomato	cytosol	59.09	55.08
KRG98474	Soybean	nucleus	58.41	53.65
Bra028961.1-P	Field mustard	cytosol	56.36	52.99
CDY36763	Canola	cytosol	56.14	52.78
CDY11980	Canola	cytosol	56.14	52.78
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	56.14	52.22
GSMUA_Achr8P24470_001	Banana	cytosol	62.95	51.58
TraesCS5A01G114700.3	Wheat	cytosol	16.59	17.63

Protein Annotations

EnsemblPlants:TraesCS2A01G077800.1	EnsemblPlantsGene:TraesCS2A01G077800	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0070403	InterPro:DHS-like_NAD/FAD-binding_dom	InterPro:IPR026590	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
PANTHER:PTHR11085	PANTHER:PTHR11085:SF20	PFAM:PF02146	PFscan:PS50305	SEG:seg	SUPFAM:SSF52467
TIGR:cd01410	MapMan:12.3.2.3	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:35492638..35498995

Molecular Weight (calculated)

48725.4 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.131

Length

440 amino acids

Sequence
(BLAST)

001: MVQIEELAVM VQKSKHLVVF TGAGISTSSG IPDFRGPKGV WTLQRAGKGV PDASLPFHRA APTLTHMALV ELERAGLLKF VISQNVDSLH LRSGFPREKL
101: AELHGNSFKE VCPCCKMEYL RDFEIETIGL KDTPRRCTDK NCGARLKDTV LDWEDALPPE EMNSAEEQCR TADLVLCLGT SLQITPACNM PLLSIKNGGK
201: VAIVNLQATP KDKKASLVIH GLVDKVIAGV MCILSLRIPP YIRTDFIQLL LRHTVKKKCV RWTLRVTSVH GMRAPLSFLR SIEVSFPDRS DMKPVVLMEQ
301: PFSLQRETSM TSIFSMLLTL NFSDGCGCSS SSIECHVNFQ KQKESFVRDR SLVLQELKCT AERQSRAGQQ SILERESLPR AETSIYAFVT NIIRYDAADL
401: KVADPKGSWM NSGSSTSSNL AKRLVEGASG YSASTKKLKC

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.