Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G092700.1 | Wheat | cytosol | 55.87 | 64.52 |
KXG26572 | Sorghum | cytosol | 56.98 | 64.29 |
TraesCS2A01G077800.1 | Wheat | cytosol | 51.58 | 62.95 |
Os04t0271000-01 | Rice | cytosol | 55.68 | 61.9 |
Zm00001d025705_P008 | Maize | cytosol | 57.17 | 61.4 |
KRH46385 | Soybean | nucleus | 48.98 | 60.74 |
VIT_19s0015g00570.t01 | Wine grape | cytosol | 51.58 | 60.61 |
KRG98474 | Soybean | nucleus | 53.82 | 60.33 |
Solyc07g065550.2.1 | Tomato | cytosol | 52.7 | 59.96 |
CDY11980 | Canola | cytosol | 51.58 | 59.19 |
CDY36763 | Canola | cytosol | 51.4 | 58.97 |
Bra028961.1-P | Field mustard | cytosol | 51.4 | 58.97 |
PGSC0003DMT400057382 | Potato | cytosol | 47.3 | 58.8 |
AT5G55760.1 | Thale cress | cytosol, nucleus, peroxisome | 51.77 | 58.77 |
TraesCS2D01G075800.1 | Wheat | cytosol | 56.61 | 44.84 |
HORVU2Hr1G012930.6 | Barley | mitochondrion | 55.68 | 41.94 |
GSMUA_Achr6P25880_001 | Banana | cytosol, plastid | 13.78 | 16.09 |
Protein Annotations
MapMan:12.3.2.3 | Gene3D:2.20.28.200 | Gene3D:3.40.50.1220 | InterPro:DHS-like_NAD/FAD-binding_dom | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0070403 | EnsemblPlantsGene:GSMUA_Achr8G24470_001 |
EnsemblPlants:GSMUA_Achr8P24470_001 | EnsemblPlants:GSMUA_Achr8T24470_001 | InterPro:IPR026590 | UniProt:M0TTA0 | PFAM:PF02146 | PFscan:PS50305 |
PANTHER:PTHR11085 | PANTHER:PTHR11085:SF20 | SUPFAM:SSF52467 | InterPro:Sirtuin | InterPro:Ssirtuin_cat_dom | TMHMM:TMhelix |
UniParc:UPI000294AE5F | SEG:seg | : | : | : | : |
Description
NAD-dependent deacetylase sirtuin-6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G24470_001]
Coordinates
chr8:-:28655553..28671016
Molecular Weight (calculated)
60246.7 Da
IEP (calculated)
8.290
GRAVY (calculated)
-0.057
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGYAQKLS YREDVGTVGM SEIFDPPDLL QQKIEELALM IKKSKHLVAF TGAGISTSSG IPDFRGPKGV WTLQRAGMGL PEASLPFHRA MPSLTHMALV
101: ELERADILKF VISQNVDSLH LRSGIPREKL AELHGNSFRE VCPACGIEYI RDFEVETIGM KETSRRCSDT KCGAKLKDSV LDWEDALPPK EMNSAEKHCR
201: TADLVLCLGT SLQITPACNL PLKCIRNGGK IVIVNLQPTP KDKKASLVIH GLVDKVIAGV MNFLSLCIPP YIRIDFAQLS LSHSPKKNTY VKWTLRITSI
301: HGPRAPLAFL KSVEISFPER PDLKAAFLDK QPFHLKRETA RKRPFKMLLT FHFCDGCSCP STSIEWPIDF QVTKGSFVQD KDEVLRSLKN AAGEESHGGQ
401: YAALEAKFLP RSEVTTIAIA TSICRFDGLA DVNRRLDMIS NNCFPLIKSS SMQMERLGEF WMSRRVSIYE SQIERCPIFL CQILCIKCAY INMFFTAYLL
501: LYAFLMHILH ACEMSESSLC NSSDQPFPSI HVMKSYM
101: ELERADILKF VISQNVDSLH LRSGIPREKL AELHGNSFRE VCPACGIEYI RDFEVETIGM KETSRRCSDT KCGAKLKDSV LDWEDALPPK EMNSAEKHCR
201: TADLVLCLGT SLQITPACNL PLKCIRNGGK IVIVNLQPTP KDKKASLVIH GLVDKVIAGV MNFLSLCIPP YIRIDFAQLS LSHSPKKNTY VKWTLRITSI
301: HGPRAPLAFL KSVEISFPER PDLKAAFLDK QPFHLKRETA RKRPFKMLLT FHFCDGCSCP STSIEWPIDF QVTKGSFVQD KDEVLRSLKN AAGEESHGGQ
401: YAALEAKFLP RSEVTTIAIA TSICRFDGLA DVNRRLDMIS NNCFPLIKSS SMQMERLGEF WMSRRVSIYE SQIERCPIFL CQILCIKCAY INMFFTAYLL
501: LYAFLMHILH ACEMSESSLC NSSDQPFPSI HVMKSYM
001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA
Arabidopsis Description
SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.