Factsheet for GSMUA_Achr6P25880_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75061	Soybean	nucleus	17.17	64.23
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	48.91	63.92
KXG23116	Sorghum	plastid	53.48	62.92
Zm00001d023585_P001	Maize	plastid	47.83	62.68
Bra028643.1-P	Field mustard	mitochondrion	48.04	61.9
CDY44790	Canola	mitochondrion	48.04	61.9
Os12t0179800-01	Rice	mitochondrion	52.83	61.83
CDY40730	Canola	mitochondrion	47.83	61.62
TraesCS5D01G124700.1	Wheat	plastid	53.04	61.62
TraesCSU01G136000.1	Wheat	plastid	52.83	61.36
AT5G09230.7	Thale cress	mitochondrion	49.78	60.9
Solyc04g009430.2.1	Tomato	mitochondrion	49.78	59.48
KRH53938	Soybean	plastid	50.65	59.44
KRH64001	Soybean	plastid	50.65	59.29
TraesCS5A01G114700.3	Wheat	cytosol	53.26	59.18
VIT_07s0031g02510.t01	Wine grape	mitochondrion	53.04	57.96
HORVU5Hr1G037540.3	Barley	plastid	53.7	55.26
Zm00001d019276_P002	Maize	mitochondrion	16.96	40.41
Zm00001d046205_P001	Maize	cytosol	20.65	20.52
Zm00001d047121_P003	Maize	plastid	16.52	20.11
GSMUA_Achr8P24470_001	Banana	cytosol	16.09	13.78

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006464	GO:GO:0006471
GO:GO:0006476	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0031348
GO:GO:0034979	GO:GO:0042742	GO:GO:0046872	GO:GO:0070403	EnsemblPlantsGene:GSMUA_Achr6G25880_001	EnsemblPlants:GSMUA_Achr6P25880_001
EnsemblPlants:GSMUA_Achr6T25880_001	InterPro:IPR026590	InterPro:IPR026591	UniProt:M0TA83	HAMAP:MF_01967	PFAM:PF02146
PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf	InterPro:Sirtuin_class_II
InterPro:Ssirtuin_cat_dom	UniParc:UPI0002954695	SEG:seg	:	:	:

Description

Putative NAD-dependent ADP-ribosyltransferase sirtuin-4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25880_001]

Coordinates

chr6:-:26856586..26866185

Molecular Weight (calculated)

51560.6 Da

IEP (calculated)

8.520

GRAVY (calculated)

-0.330

Length

460 amino acids

Sequence
(BLAST)

001: MAIAMTMATS RPSVVEEFVE KIRSSYRVDF PEGFEKEFSG SECALQKELR DNGLKRPAGF GKFSPLQNLQ LVERLREVLG SISEGRSAYY LFNLLLGGVS
101: PRAILSHHDL KLTYWRGLVL KCCMHQLLAK SSYSTYESTL REQNGSHFKN LNDRKIVPDS DPPSVKDVNL LYQFIDRSRK LVVLTGAGIS TESGIPDYRS
201: PNGAYSTGFK PITHQEFVRS SRARRRYWAR SYAGWRRFLA AQPNAAHRAL ASLEKFGRIN YMVTQNVDRL HHRAGSDPLE LHGTVYSVVC LKCDNSINRD
301: SFQDRVKALN PKWAAAIESL ECGDPGSDKS FGMQQRPDAD IEIDAKFWEE DFEIPNCQQC GGILKPDVVF FGDNVPKDRA EKAKETAREC DGFLVIGSSV
401: MTMSAFRIVR AAYEANAAVA VINIGKTRCD EFVSLKINAR CGEILPRVLE MGCLAIPSIN

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.