Factsheet for Bra028643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40730	Canola	mitochondrion	98.6	98.6
AT5G09230.7	Thale cress	mitochondrion	90.2	85.64
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	68.91	69.89
KRH64001	Soybean	plastid	71.43	64.89
KRH53938	Soybean	plastid	70.31	64.03
Solyc04g009430.2.1	Tomato	mitochondrion	68.07	63.12
VIT_07s0031g02510.t01	Wine grape	mitochondrion	70.03	59.38
Os12t0179800-01	Rice	mitochondrion	61.06	55.47
KXG23116	Sorghum	plastid	60.22	54.99
TraesCS5D01G124700.1	Wheat	plastid	60.5	54.55
Zm00001d023585_P001	Maize	plastid	53.5	54.42
TraesCSU01G136000.1	Wheat	plastid	59.94	54.04
TraesCS5A01G114700.3	Wheat	cytosol	60.5	52.17
HORVU5Hr1G037540.3	Barley	plastid	60.78	48.55
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	61.9	48.04
Zm00001d019276_P002	Maize	mitochondrion	18.49	34.2
Bra028961.1-P	Field mustard	cytosol	23.53	17.95
Zm00001d047121_P003	Maize	plastid	17.37	16.4
Zm00001d046205_P001	Maize	cytosol	19.89	15.33

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	EnsemblPlantsGene:Bra028643	EnsemblPlants:Bra028643.1
EnsemblPlants:Bra028643.1-P	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006464	GO:GO:0006471	GO:GO:0006476	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0031348	GO:GO:0034979	GO:GO:0042742	GO:GO:0046872
GO:GO:0070403	InterPro:IPR026590	InterPro:IPR026591	UniProt:M4EIM8	HAMAP:MF_01967	PFAM:PF02146
PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf	InterPro:Sirtuin_class_II
InterPro:Ssirtuin_cat_dom	UniParc:UPI00025432D4	SEG:seg	:	:	:

Description

AT5G09230 (E=2e-176) SRT2 | SRT2 (SIRTUIN 2); DNA binding / NAD or NADH binding / NAD-dependent histone deacetylase/ zinc ion binding

Coordinates

chrA02:+:2726608..2728322

Molecular Weight (calculated)

39678.8 Da

IEP (calculated)

8.898

GRAVY (calculated)

-0.292

Length

357 amino acids

Sequence
(BLAST)

001: MFTMCQPLRS KANLVMLFKG YRRFVRTTCR VSIPGGSLGN ELKAPPRFLR DKKIVPDADP PHKEDIHKLY QLFEQSKRLT ILTGAGISTE CGIPDYRSPN
101: GAYSSGFKPI THQEFTRSSR SRRRYWARSY AGWRRFAAAQ PGPAHTALAS LERAGRIDCI ITQNVDRLHH RAGSDPLELH GTVYTVMCLD CGFSFPRDLF
201: QDQLKALNPK WAEALESIDH GEPGSEKTFG MKQRPDGDIE IDEKFWEEGF NIPVCEKCQG VLKPDVIFFG DNIPKERATQ AMEAAKQSDA FLVLGSSLMT
301: MSAFRLVRAA HEAGAMTAIV NIGVTRADDI VPLKISARVG EILPRVLDVG SLGVPAV

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.