CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023585_P001	Maize	plastid	83.63	93.16
Os12t0179800-01	Rice	mitochondrion	83.38	82.95
TraesCS5D01G124700.1	Wheat	plastid	81.33	80.3
TraesCSU01G136000.1	Wheat	plastid	80.56	79.55
TraesCS5A01G114700.3	Wheat	cytosol	81.07	76.57
HORVU5Hr1G037540.3	Barley	plastid	80.31	70.25
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	54.73	60.8
Zm00001d019276_P002	Maize	mitochondrion	29.92	60.62
CDY44790	Canola	mitochondrion	55.24	60.5
Bra028643.1-P	Field mustard	mitochondrion	54.99	60.22
CDY40730	Canola	mitochondrion	54.99	60.22
KRH75061	Soybean	nucleus	18.41	58.54
AT5G09230.7	Thale cress	mitochondrion	56.27	58.51
KRH53938	Soybean	plastid	57.29	57.14
Solyc04g009430.2.1	Tomato	mitochondrion	56.01	56.88
KRH64001	Soybean	plastid	56.52	56.23
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	62.92	53.48
VIT_07s0031g02510.t01	Wine grape	mitochondrion	56.78	52.73
Zm00001d047121_P003	Maize	plastid	27.88	28.84
Zm00001d046205_P001	Maize	cytosol	32.48	27.43
KXG26572	Sorghum	cytosol	20.2	16.6

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	UniProt:A0A1B6PBP5	InterPro:DHS-like_NAD/FAD-binding_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0005975
GO:GO:0006464	GO:GO:0006471	GO:GO:0006476	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0030570	GO:GO:0031348	GO:GO:0034979	GO:GO:0042742
GO:GO:0045490	GO:GO:0046872	GO:GO:0070403	InterPro:IPR026590	InterPro:IPR026591	EnsemblPlants:KXG23116
ProteinID:KXG23116	ProteinID:KXG23116.2	HAMAP:MF_01967	PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR43688
EnsemblPlantsGene:SORBI_3008G058100	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf	InterPro:Sirtuin_class_II	InterPro:Ssirtuin_cat_dom
UniParc:UPI000B8B9AE2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:6041699..6047009

Molecular Weight (calculated)

43563.7 Da

IEP (calculated)

8.467

GRAVY (calculated)

-0.369

Length

391 amino acids

Sequence
(BLAST)

001: MQPTYTCNGT QIIAGLTGAL WAASRRSYAH FCNFQASGNN ALLYGRENPL SLRYSFRFLK ARNNHSSAVA PKDYCETYIQ FLRDKRIVPD SDPPSSKDVD
101: LLYQFIDKSK RLMVVTGAGM STESGIPDYR SPNGAYSTGF KPLTHQEFVR SIQARRRYWA RSYAGWRRFR RAQPNAAHYA LASLERIGRV HSMVTQNVDR
201: LHHRAGSNPL ELHGSVYDVI CLECGTSISR ESFQEEVKNL NPKWAQAIDS LEVGQPGSDK SFGMQQRPDG DVEIDEKFWE QDFEIPSCHQ CGGVLKPDVV
301: MFGDNVPQER AESAKEAART CDALLVVGSA LMTMSAFRLA RLAHEAHAPI AAVSIGETRA DSILSLKINA RCGEILPRIL QMGSLVVPNI S

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.