CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40730	Canola	mitochondrion	98.6	98.6
AT5G09230.7	Thale cress	mitochondrion	89.92	85.37
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	68.35	69.32
KRH64001	Soybean	plastid	71.99	65.39
KRH53938	Soybean	plastid	71.15	64.8
Solyc04g009430.2.1	Tomato	mitochondrion	67.51	62.6
VIT_07s0031g02510.t01	Wine grape	mitochondrion	70.31	59.62
Os12t0179800-01	Rice	mitochondrion	61.62	55.98
KXG23116	Sorghum	plastid	60.5	55.24
TraesCS5D01G124700.1	Wheat	plastid	61.06	55.05
Zm00001d023585_P001	Maize	plastid	54.06	54.99
TraesCSU01G136000.1	Wheat	plastid	60.5	54.55
TraesCS5A01G114700.3	Wheat	cytosol	61.06	52.66
HORVU5Hr1G037540.3	Barley	plastid	61.34	48.99
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	61.9	48.04
Zm00001d019276_P002	Maize	mitochondrion	18.77	34.72
CDY11980	Canola	cytosol	22.97	17.52
CDY36763	Canola	cytosol	22.69	17.31
Zm00001d047121_P003	Maize	plastid	17.37	16.4
Zm00001d046205_P001	Maize	cytosol	20.17	15.55

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	GO:A0A078I1P3	UniProt:A0A078I1P3
EnsemblPlants:CDY44790	ProteinID:CDY44790	ProteinID:CDY44790.1	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0006464	GO:GO:0006471	GO:GO:0006476	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0034979	GO:GO:0046872	GO:GO:0070403	EnsemblPlantsGene:GSBRNA2T00080794001	InterPro:IPR026590	InterPro:IPR026591
HAMAP:MF_01967	PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467	InterPro:Sirtuin
InterPro:Sirtuin_cat_small_dom_sf	InterPro:Sirtuin_class_II	InterPro:Ssirtuin_cat_dom	UniParc:UPI0004EF3E91	SEG:seg	:

Description

BnaC02g00970DNAD-dependent protein deacylase [Source:UniProtKB/TrEMBL;Acc:A0A078I1P3]

Coordinates

chrLK032601:+:120068..122177

Molecular Weight (calculated)

39534.6 Da

IEP (calculated)

8.795

GRAVY (calculated)

-0.276

Length

357 amino acids

Sequence
(BLAST)

001: MLTLCQPLRS RGNLVMLFKG CRRFVRTTCR VSIPGGSLGN ELKAPPRFLR DKKIVPDADP PHKEDIHKLY QLFEQSKRLT ILTGAGISTE CGIPDYRSPN
101: GAYSSGFKPI THQEFTRSSR SRRRYWARSY AGWRRFAAAQ PGPAHTALAS LERAGRIDCI ITQNVDRLHH RAGSDPLELH GTVYTVLCLD CGFSFPRDLF
201: QDQLKALNPK WAEALESIDH GEPGSEKSFG MKQRPDGDIE IDEKFWEDGF NIPVCEKCQG VLKPDVIFFG DNIPKERATQ AMEAAKQSDA FLVLGSSLMT
301: MSAFRLVRAA HEAGAMTAIV NIGVTRADDI VPLKISARVG EILPRVLDVG SLGVPAV

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.