Factsheet for TraesCS5D01G124700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G136000.1	Wheat	plastid	98.48	98.48
TraesCS5A01G114700.3	Wheat	cytosol	94.7	90.58
Os12t0179800-01	Rice	mitochondrion	86.62	87.28
HORVU5Hr1G037540.3	Barley	plastid	95.2	84.34
KXG23116	Sorghum	plastid	80.3	81.33
Zm00001d023585_P001	Maize	plastid	71.46	80.63
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	54.8	61.65
CDY44790	Canola	mitochondrion	55.05	61.06
CDY40730	Canola	mitochondrion	54.8	60.78
Bra028643.1-P	Field mustard	mitochondrion	54.55	60.5
KRH75061	Soybean	nucleus	18.43	59.35
AT5G09230.7	Thale cress	mitochondrion	54.8	57.71
KRH53938	Soybean	plastid	57.07	57.65
Solyc04g009430.2.1	Tomato	mitochondrion	55.56	57.14
KRH64001	Soybean	plastid	56.57	57.0
Zm00001d019276_P002	Maize	mitochondrion	26.26	53.89
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	61.62	53.04
VIT_07s0031g02510.t01	Wine grape	mitochondrion	55.56	52.26
Zm00001d047121_P003	Maize	plastid	26.26	27.51
Zm00001d046205_P001	Maize	cytosol	29.8	25.49
TraesCS2D01G075800.1	Wheat	cytosol	20.2	11.8

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0070403	InterPro:IPR026590	InterPro:IPR026591	HAMAP:MF_01967
PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf
InterPro:Sirtuin_class_II	InterPro:Ssirtuin_cat_dom	EnsemblPlantsGene:TraesCS5D01G124700	EnsemblPlants:TraesCS5D01G124700.1	TIGR:cd01409	SEG:seg

Description

No Description!

Coordinates

chr5D:+:190263138..190267987

Molecular Weight (calculated)

43786.4 Da

IEP (calculated)

9.622

GRAVY (calculated)

-0.285

Length

396 amino acids

Sequence
(BLAST)

001: MAAVLAAHGS RVSASIIAGF GSALRGIPKG FCPRFYNIQA SIYNGLVHRR KIPLPLRCSF RSIQARNNHS SSAVVPKDYC ETYIQFLRDK RIVPDSDPPS
101: SKDVDLLYRF IDKSNKLMVL TGAGMSTESG IPDYRSPNGA YSSGFKPLTH QEFVRSIRAR RRYWARSYAG WRRFRRAQPN TAHYALASLE RIGRVHTMVT
201: QNVDRLHHRA GSKPVELHGS VYEVICLDCG TSISRESFQE QVKDLNPKWA LAIDSLEEGQ PGSSRSFGMQ QRPDGDIEID EKFWEQDFDI PSCSQCGGVL
301: KPDVVMFGDN VPRERADSAK EAARNCDALL VVGSAVMTMS AFRLARLAHE ANAPIAAINI GGTRADSIIS LKINARCGEI LPRVLQMGSL AVPSIS

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.