CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53938	Soybean	plastid	81.3	25.51
KRH64001	Soybean	plastid	81.3	25.45
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	65.04	22.73
Solyc04g009430.2.1	Tomato	mitochondrion	65.85	21.04
VIT_07s0031g02510.t01	Wine grape	mitochondrion	65.85	19.24
TraesCSU01G136000.1	Wheat	plastid	59.35	18.43
TraesCS5D01G124700.1	Wheat	plastid	59.35	18.43
KXG23116	Sorghum	plastid	58.54	18.41
Os12t0179800-01	Rice	mitochondrion	58.54	18.32
TraesCS5A01G114700.3	Wheat	cytosol	59.35	17.63
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	64.23	17.17
HORVU5Hr1G037540.3	Barley	plastid	60.98	16.78
Zm00001d023585_P001	Maize	plastid	42.28	14.81
Zm00001d019276_P002	Maize	mitochondrion	21.14	13.47
Zm00001d047121_P003	Maize	plastid	20.33	6.61
KRH46385	Soybean	nucleus	22.76	6.47
KRG98474	Soybean	nucleus	24.39	6.26
Zm00001d046205_P001	Maize	cytosol	22.76	6.05

Protein Annotations

EMBL:ACUP02000111	EnsemblPlants:KRH75061	EnsemblPlantsGene:GLYMA_01G059700	Gene3D:3.40.50.1220	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0070403	InterPro:DHS-like_NAD/FAD-binding_dom	InterPro:IPR026590	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
PANTHER:PTHR43688	PFAM:PF02146	PFscan:PS50305	ProteinID:KRH75061	ProteinID:KRH75061.1	SEG:seg
SUPFAM:SSF52467	UniParc:UPI0006ED5D29	UniProt:A0A0R0LEH1	MapMan:12.3.2.3	MapMan:18.2.7	:

Description

hypothetical protein

Coordinates

chr1:+:7890955..7892527

Molecular Weight (calculated)

14026.5 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.478

Length

123 amino acids

Sequence
(BLAST)

001: MTGEDEEVTT NDKFLSSPNG AYSSGFKPIT HQEFLRSSRA RRRYWARSYA GWRQFTATQP SATHTALATL DKAGRIDLMI TQNVDRLHHR VGSNPLEMHG
101: TIYTVICIDC GYSFCRSLFL DQF

Best Arabidopsis Sequence Match ( AT5G09230.1 )
(BLAST)

001: MNMRRVFGGV STDLFPSRSM YRPLQSGGNL VMLFKGCRRF VRTTCRVSIP GGSLGNESKA PPRFLRDRKI VPDADPPNME DIHKLYRLFE QSSRLTILTG
101: AGVSTECGIP DYRSPNGAYS SGFKPITHQE FTRSSRARRR YWARSYAGWR RFTAAQPGPA HTALASLEKA GRINFMITQN VDRLHHRAGS DPLELHGTVY
201: TVMCLECGFS FPRDLFQDQL KAINPKWAEA IESIDHGDPG SEKSFGMKQR PDGDIEIDEK FWEEGFHIPV CEKCKGVLKP DVIFFGDNIP KERATQAMEV
301: AKQSDAFLVL GSSLMTMSAF RLCRAAHEAG AMTAIVNIGE TRADDIVPLK INARVGEILH RVLDVGSLSV PAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.