Factsheet for VIT_07s0031g02510.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	58.91	70.45
CDY44790	Canola	mitochondrion	59.62	70.31
Bra028643.1-P	Field mustard	mitochondrion	59.38	70.03
CDY40730	Canola	mitochondrion	59.38	70.03
KRH64001	Soybean	plastid	64.37	68.96
AT5G09230.7	Thale cress	mitochondrion	61.28	68.62
KRH53938	Soybean	plastid	62.0	66.58
KRH75061	Soybean	nucleus	19.24	65.85
Solyc04g009430.2.1	Tomato	mitochondrion	60.09	65.71
KXG23116	Sorghum	plastid	52.73	56.78
Os12t0179800-01	Rice	mitochondrion	52.73	56.49
TraesCS5D01G124700.1	Wheat	plastid	52.26	55.56
Zm00001d023585_P001	Maize	plastid	46.32	55.56
TraesCSU01G136000.1	Wheat	plastid	51.78	55.05
TraesCS5A01G114700.3	Wheat	cytosol	52.49	53.38
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	57.96	53.04
HORVU5Hr1G037540.3	Barley	plastid	53.68	50.56
Zm00001d019276_P002	Maize	mitochondrion	15.91	34.72
Zm00001d047121_P003	Maize	plastid	16.15	17.99
Zm00001d046205_P001	Maize	cytosol	19.0	17.28
VIT_19s0015g00570.t01	Wine grape	cytosol	17.58	16.19

Protein Annotations

EntrezGene:100242368	wikigene:100242368	MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220
ProteinID:AEV46831	ProteinID:AEV46831.1	ProteinID:CBI21603	ProteinID:CBI21603.3	UniProt:D7SWF4	InterPro:DHS-like_NAD/FAD-binding_dom
EMBL:FN595233	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006464
GO:GO:0006471	GO:GO:0006476	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0034979	GO:GO:0046872	GO:GO:0070403
InterPro:IPR026590	InterPro:IPR026591	EMBL:JN252255	EntrezGene:LOC100242368	wikigene:LOC100242368	HAMAP:MF_01967
PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf
InterPro:Sirtuin_class_II	InterPro:Ssirtuin_cat_dom	UniParc:UPI0001BE2079	ArrayExpress:VIT_07s0031g02510	EnsemblPlantsGene:VIT_07s0031g02510	EnsemblPlants:VIT_07s0031g02510.t01
RefSeq:XP_002274454	RefSeq:XP_002274454.1	:	:	:	:

Description

NAD-dependent protein deacylase [Source:UniProtKB/TrEMBL;Acc:D7SWF4]

Coordinates

chr7:-:18709381..18723402

Molecular Weight (calculated)

47080.3 Da

IEP (calculated)

9.647

GRAVY (calculated)

-0.320

Length

421 amino acids

Sequence
(BLAST)

001: MRKMRRRNRY HYSILRIEAR RHILYESEEG IDWNQNQRQM TVSSTSIFRS VRKVLGTAVT DTIQSSSKNW QSLFRVRSVL PFQDSVKFVQ TSCRISVPGT
101: SSGSEQKVPS NFLRDKKLVP ESDPPNIEDI KFLYQFFDSS SKVVVLTGAG ISTECGIPDY RSPNGAYSSG YKPITHQEFV RSSKARRRYW ARSYAGWKRF
201: IAAQPGASHS ALASLEKAGR INYIITQNVD RLHHRAGSSP LELHGTVYSV VCLDCGYLIN RNLFQDELKA LNPKWAAAIE NLKHDSPGSD KSFGMKQRPD
301: GDIEIDEKFW EENFCIPTCQ KCKGVLKPDV VFFGDNIPKD RAADAMAAVR GCDALLVVGS SLMTMSAFRL VRAAHEAGAA TAIVNVGNTR ADDFVSLKIN
401: ARCGEILPRL LDIGCLSIPV I

Best Arabidopsis Sequence Match ( AT5G09230.7 )
(BLAST)

001: MLSMNMRRVF GGVSTDLFPS RSMYRPLQSG GNLVMLFKGC RRFVRTTCRV SIPGGSLGNE SKAPPRFLRD RKIVPDADPP NMEDIHKLYR LFEQSSRLTI
101: LTGAGVSTEC GIPDYRSPNG AYSSGFKPIT HQEFTRSSRA RRRYWARSYA GWRRFTAAQP GPAHTALASL EKAGRINFMI TQNVDRLHHR AGSDPLELHG
201: TVYTVMCLEC GFSFPRDLFQ DQLKAINPKW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA
301: MEVAKQSDAF LVLGSSLMTM SAFRLCRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.