Factsheet for Solyc04g009430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082473	Potato	cytosol, mitochondrion	87.27	95.45
Bra028643.1-P	Field mustard	mitochondrion	63.12	68.07
CDY40730	Canola	mitochondrion	62.6	67.51
CDY44790	Canola	mitochondrion	62.6	67.51
AT5G09230.7	Thale cress	mitochondrion	65.19	66.76
KRH75061	Soybean	nucleus	21.04	65.85
KRH64001	Soybean	plastid	65.71	64.38
KRH53938	Soybean	plastid	63.9	62.76
VIT_07s0031g02510.t01	Wine grape	mitochondrion	65.71	60.09
Os12t0179800-01	Rice	mitochondrion	57.66	56.49
KXG23116	Sorghum	plastid	56.88	56.01
TraesCS5D01G124700.1	Wheat	plastid	57.14	55.56
TraesCSU01G136000.1	Wheat	plastid	56.62	55.05
Zm00001d023585_P001	Maize	plastid	49.87	54.7
TraesCS5A01G114700.3	Wheat	cytosol	57.4	53.38
HORVU5Hr1G037540.3	Barley	plastid	57.92	49.89
GSMUA_Achr6P25880_001	Banana	cytosol, plastid	59.48	49.78
Zm00001d019276_P002	Maize	mitochondrion	18.18	36.27
Zm00001d046205_P001	Maize	cytosol	21.3	17.71
Zm00001d047121_P003	Maize	plastid	17.14	17.46
Solyc07g065550.2.1	Tomato	cytosol	20.52	16.74

Protein Annotations

MapMan:12.3.2.3	MapMan:18.2.7	Gene3D:3.30.1600.10	Gene3D:3.40.50.1220	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006464	GO:GO:0006471
GO:GO:0006476	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0031348
GO:GO:0034979	GO:GO:0042742	GO:GO:0046872	GO:GO:0070403	InterPro:IPR026590	InterPro:IPR026591
UniProt:K4BP99	HAMAP:MF_01967	PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR43688	SUPFAM:SSF52467
InterPro:Sirtuin	InterPro:Sirtuin_cat_small_dom_sf	InterPro:Sirtuin_class_II	EnsemblPlantsGene:Solyc04g009430.2	EnsemblPlants:Solyc04g009430.2.1	InterPro:Ssirtuin_cat_dom
UniParc:UPI00027657EE	SEG:seg	:	:	:	:

Description

NAD-dependent protein deacylase SRT2 [Source:Projected from Arabidopsis thaliana (AT5G09230) UniProtKB/Swiss-Prot;Acc:Q94AQ6]

Coordinates

chr4:+:2843670..2851326

Molecular Weight (calculated)

42611.0 Da

IEP (calculated)

9.001

GRAVY (calculated)

-0.285

Length

385 amino acids

Sequence
(BLAST)

001: MSLRLCCRPS ISGFKNKRDL LGLELAAYQS SKTMGKWLSG VKKFIPFEGY VKSVKTAARI SFPKISADCQ DKEPSNFLSH KKMVPYSNPP STEDVDSLYE
101: FFDRSTKLVV LTGAGMSTES GIPDYRSPNG AYSTGFKPIT HQEFLRSIKA RRRYWARSYA GWRRFTAAQP STGHIALSSL EKAGHISFMI TQNVDRLHHR
201: AGSNPLELHG TVYIVACTNC GFSLPRDLFQ DQVKAHNPKW AEAIENLDYD SRSDKSFGMK QRPDGDIEID EKFWEEDFYI PECQSCQGVL KPDVVFFGDN
301: VPKSRADAAM EAAKGCDAFL VLGSSLMTMS AFRLIKAARE AGAATAIINI GATRADDIVP LKISARVGEI LPRLLNVGSL SIPAP

Best Arabidopsis Sequence Match ( AT5G09230.2 )
(BLAST)

001: MNMRRVFGGV STDLFPSRSM YRPLQSGGNL VMLFKGCRRF VRTTCRVSIP GGSLGNESKA PPRFLRDRKI VPDADPPNME DIHKLYRLFE QSSRLTILTG
101: AGVSTECGIP DYRSPNGAYS SGFKPITHQE FTRSSRARRR YWARSYAGWR RFTAAQPGPA HTALASLEKA GRINFMITQN VDRLHHRAGS DPLELHGTVY
201: TVMCLECGFS FPRDLFQDQL KAINPKWAEA IESIDHGDPG SEKSFGMKQR PDGDIEIDEK FWEEGFHIPV CEKCKGVLKP DVIFFGDNIP KERATQAMEV
301: AKQSDAFLVL GSSLMTMSAF RLCRAAHEAG AMTAIVNIGE TRADDIVPLK INARVGEILH RVLDVGSLSV PAL

Arabidopsis Description

SRT2sirtuin 2 [Source:TAIR;Acc:AT5G09230]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.