Factsheet for TraesCS2D01G075800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G092700.1	Wheat	cytosol	67.7	98.71
TraesCS2A01G077800.1	Wheat	cytosol	63.72	98.18
HORVU2Hr1G012930.6	Barley	mitochondrion	88.94	84.57
KXG26572	Sorghum	cytosol	56.05	79.83
Os04t0271000-01	Rice	cytosol	56.19	78.88
Zm00001d025705_P008	Maize	cytosol	55.9	75.8
VIT_19s0015g00570.t01	Wine grape	cytosol	40.71	60.39
Solyc07g065550.2.1	Tomato	cytosol	42.04	60.38
PGSC0003DMT400057382	Potato	cytosol	37.61	59.03
KRH46385	Soybean	nucleus	37.32	58.43
KRG98474	Soybean	nucleus	41.0	58.04
Bra028961.1-P	Field mustard	cytosol	39.82	57.69
CDY36763	Canola	cytosol	39.68	57.48
CDY11980	Canola	cytosol	39.53	57.27
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	39.68	56.87
GSMUA_Achr8P24470_001	Banana	cytosol	44.84	56.61
TraesCS5D01G124700.1	Wheat	plastid	11.8	20.2

Protein Annotations

EnsemblPlants:TraesCS2D01G075800.1	EnsemblPlantsGene:TraesCS2D01G075800	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0070403	InterPro:DHS-like_NAD/FAD-binding_dom	InterPro:IPR026590	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
ncoils:Coil	PANTHER:PTHR11085	PANTHER:PTHR11085:SF20	PFAM:PF02146	PFscan:PS50305	SEG:seg
SUPFAM:SSF52467	TIGR:cd01410	MapMan:12.3.2.3	:	:	:

Description

No Description!

Coordinates

chr2D:-:32472553..32481888

Molecular Weight (calculated)

74544.9 Da

IEP (calculated)

8.602

GRAVY (calculated)

-0.308

Length

678 amino acids

Sequence
(BLAST)

001: MASVSQDELA LLSGREHAAH LANSCLRADF EAVARVLDAR DRKLAKDKAA LKAVLADLDA ARAQEREVAE AKSKLEATVL RKNYEAALDS RRRPLDSAKE
101: VARLLGGSVR RDESLVEEAN EGEVEDLDDT DLYVPDCVWE RRGGGGMECD GVRRGTMAVR RNAAVAGEAR RRAAVAVLEE MGPAQLGQGE GSNRKTATGL
201: ENLKKSRKMS LGYAEKLSYR EDVGTVGMPE KFDSPKLLQG KIEELAVMVQ KSKHLVVFTG AGISTSSGIP DFRGPKGVWT LQRAGKGVPD ASLPFHRAAP
301: TLTHMALVEL ERAGLLKFVI SQNVDSLHLR SGFPREKLAE LHGNSFKEVC PCCKTEYLRD FEIETIGLKD TPRRCADKNC GARLKDTVLD WEDALPPEEM
401: NSAEEQCRTA DLVLCLGTSL QITPACNMPL LSIKNGGKVA IVNLQATPKD KKASLVIHGL VDKVIAGVMC ILSLRIPPYI RTDFIQLLLR HTVKKKCVRW
501: TLRVTSVHGM RAPLSFLRSI EVSFPDRSDM KPVVLMEQPF SLQRETSMTS IFSMLLTLKF SDGCGCSSSS IECHVNFQKQ KESFVRDRSL VLQELKCTAE
601: RQSRAGQQSI LERESLPRAE TSIHAFVTNI IRYDAEDLKV ADPKGSWMNS GSSTSSNLAK RLVEGASGYS ASTKKLKC

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.