Factsheet for Os04t0271000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G092700.1	Wheat	cytosol	77.85	80.86
KXG26572	Sorghum	cytosol	79.5	80.67
TraesCS2A01G077800.1	Wheat	cytosol	72.88	80.0
Zm00001d025705_P008	Maize	cytosol	78.05	75.4
Solyc07g065550.2.1	Tomato	cytosol	58.8	60.17
VIT_19s0015g00570.t01	Wine grape	cytosol	56.31	59.52
KRH46385	Soybean	nucleus	53.21	59.35
KRG98474	Soybean	nucleus	58.8	59.29
PGSC0003DMT400057382	Potato	cytosol	52.59	58.8
CDY36763	Canola	cytosol	56.31	58.12
Bra028961.1-P	Field mustard	cytosol	56.11	57.91
CDY11980	Canola	cytosol	55.69	57.48
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	55.9	57.08
TraesCS2D01G075800.1	Wheat	cytosol	78.88	56.19
GSMUA_Achr8P24470_001	Banana	cytosol	61.9	55.68
HORVU2Hr1G012930.6	Barley	mitochondrion	77.85	52.73
Os12t0179800-01	Rice	mitochondrion	15.32	18.83

Protein Annotations

MapMan:12.3.2.3	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	EntrezGene:4335342	ProteinID:BAF14257.1	ProteinID:BAS88327.1
ProteinID:CAD39890.2	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0046872
GO:GO:0070403	InterPro:IPR026590	EnsemblPlantsGene:Os04g0271000	EnsemblPlants:Os04t0271000-01	PFAM:PF02146	PFscan:PS50305
PANTHER:PTHR11085	PANTHER:PTHR11085:SF20	UniProt:Q7XWV4	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom
UniParc:UPI000021C905	RefSeq:XP_015636502.1	RefSeq:XP_015636503.1	:	:	:

Description

osSRT701, OsSIRT701, OsSRT1, OS-SIR2NAD+-dependent histone deacetylase, Seed development (Os04t0271000-01);Similar to SIR2-like protein. (Os04t0271000-02)

Coordinates

chr4:-:11316236..11328577

Molecular Weight (calculated)

53898.6 Da

IEP (calculated)

9.822

GRAVY (calculated)

-0.302

Length

483 amino acids

Sequence
(BLAST)

001: MSLGYAEKLS YREDVGNVGM PEIFDSPELL HKKIEELAVM VRESKHLVVF TGAGISTSSG IPDFRGPKGV WTLQRSGKGV PGASLPFHRA VPTLTHMALV
101: ELEKTGRLKF VISQNVDSLH LRSGLPREKL AELHGNSFKE ICPSCKKEYL RDFEIETIGL KDTPRRCSDK NCGARLKDTV LDWEDALPPE EMDAAKEQCQ
201: KADLVLCLGT SLQITPACNM PLLSLKNGGR VAIVNLQATP KDKKASLVIH GLVDKVIAGV MYMMNLRIPP YIRTDFVQIS LRNSVKKKCV RWTLRVTSIH
301: GLRAPLPFLR SVEVSFPERP DMKPVVLKEQ PFSLQRETSM NRPFVMLLTF NFSDGCGCSS SSIEWPVDFL KQKDSFVRDR SLVLQELQHA AEHRSRAGQH
401: AILEREGVPR AETSIHALVT NIVRYDTEDS KAAVPMATWM NSNGSLSKRH MDAIGCNPAS SKKQKLVATR HRRKGLNPAT QKV

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.