CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025705_P008	Maize	cytosol	94.54	90.0
TraesCS2B01G092700.1	Wheat	cytosol	79.2	81.08
TraesCS2A01G077800.1	Wheat	cytosol	73.74	79.77
Os04t0271000-01	Rice	cytosol	80.67	79.5
Solyc07g065550.2.1	Tomato	cytosol	60.08	60.59
VIT_19s0015g00570.t01	Wine grape	cytosol	57.98	60.39
PGSC0003DMT400057382	Potato	cytosol	54.2	59.72
KRH46385	Soybean	nucleus	53.78	59.12
KRG98474	Soybean	nucleus	58.82	58.46
CDY36763	Canola	cytosol	56.3	57.27
Bra028961.1-P	Field mustard	cytosol	56.09	57.05
CDY11980	Canola	cytosol	56.09	57.05
GSMUA_Achr8P24470_001	Banana	cytosol	64.29	56.98
AT5G55760.1	Thale cress	cytosol, nucleus, peroxisome	55.88	56.24
TraesCS2D01G075800.1	Wheat	cytosol	79.83	56.05
HORVU2Hr1G012930.6	Barley	mitochondrion	78.15	52.17
KXG23116	Sorghum	plastid	16.6	20.2

Protein Annotations

MapMan:12.3.2.3	Gene3D:2.20.28.200	Gene3D:3.40.50.1220	UniProt:A0A1B6PLP2	InterPro:DHS-like_NAD/FAD-binding_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0070403	InterPro:IPR026590	EnsemblPlants:KXG26572	ProteinID:KXG26572
ProteinID:KXG26572.1	ProteinID:KXG26573.1	ProteinID:KXG26574.1	PFAM:PF02146	PFscan:PS50305	PANTHER:PTHR11085
PANTHER:PTHR11085:SF20	EnsemblPlantsGene:SORBI_3006G123600	SUPFAM:SSF52467	InterPro:Sirtuin	InterPro:Ssirtuin_cat_dom	UniParc:UPI0001C80619

Description

hypothetical protein

Coordinates

chr6:-:48918184..48934920

Molecular Weight (calculated)

53242.8 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.286

Length

476 amino acids

Sequence
(BLAST)

001: MSLGYAEKLS YREDVGTVGM PEIFEPPELV QNKIEELAAM VQKSKHLVVF TGAGISTSSG IPDFRGPKGV WTLQRAGKGV PNASLPFHRA VPSLTHMALV
101: ELERGGFLKF VISQNVDSLH LRSGFPREKL AELHGNSFKE ICPCCKTEYL RDFEIETIGL KDTPRRCSDK NCGARLKDTV LDWDDALPPE EMNSAKEHCR
201: SADLVLCLGT SLQITPACNM PLMSIKNGGR VAIVNLQATP KDKKASLVIH GLVDKVIAGV MSKLSLRIPP YIRTDFVQLT LRHSVKKKCV RWTLRVTSIH
301: GLRAPLPFLQ SVKVSFPERP DMKSVVLKEQ PFSLQRETSM NKPFFMLLTL NFSDGCSCLS SSIGWPVDFQ KQKDSFVRDR ALVLKELQSA AEHETCGGQQ
401: EVLEREILPR AETSIHGIVT NVVRYDIEAE KLAPPKDDLM NHSRSNPAKR HMEGTDCHSP LPKKLKYFLK DERLNC

Best Arabidopsis Sequence Match ( AT5G55760.1 )
(BLAST)

001: MSLGYAEKLS FIEDVGQVGM AEFFDPSHLL QCKIEELAKL IQKSKHLVVF TGAGISTSCG IPDFRGPKGI WTLQREGKDL PKASLPFHRA MPSMTHMALV
101: ELERAGILKF VISQNVDGLH LRSGIPREKL SELHGDSFME MCPSCGAEYL RDFEVETIGL KETSRKCSVE KCGAKLKDTV LDWEDALPPK EIDPAEKHCK
201: KADLVLCLGT SLQITPACNL PLKCLKGGGK IVIVNLQKTP KDKKANVVIH GLVDKVVAGV MESLNMKIPP YVRIDLFQII LTQSISGDQR FINWTLRVAS
301: VHGLTSQLPF IKSIEVSFSD NHNYKDAVLD KQPFLMKRRT ARNETFDIFF KVNYSDGCDC VSTQLSLPFE FKISTEEHVE IIDKEAVLQS LREKAVEESS
401: CGQSGVVERR VVSEPRSEAV VYATVTSLRT YHSQQSLLAN GDLKWKLEGS GTSRKRSRTG KRKSKALAEE TKA

Arabidopsis Description

SRT1SRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UR49]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.