Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
26928395
|
msms PMID:
26928395
doi
Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G044360.1 | Barley | extracellular | 100.0 | 100.0 |
| TraesCS2B01G124600.1 | Wheat | extracellular | 97.45 | 97.45 |
| TraesCS2D01G108500.1 | Wheat | extracellular | 96.5 | 96.5 |
| TraesCS2D01G107600.1 | Wheat | extracellular | 96.18 | 96.49 |
| TraesCS2B01G126200.1 | Wheat | extracellular | 96.18 | 96.18 |
| HORVU2Hr1G018570.1 | Barley | extracellular | 95.22 | 95.53 |
| TraesCS2B01G125800.1 | Wheat | extracellular | 94.9 | 94.9 |
| TraesCS2A01G108600.1 | Wheat | extracellular | 94.27 | 94.87 |
| OQU90468 | Sorghum | extracellular | 77.71 | 76.49 |
| Zm00001d022457_P002 | Maize | extracellular | 78.98 | 72.73 |
| HORVU2Hr1G018480.1 | Barley | extracellular | 69.75 | 69.52 |
| HORVU2Hr1G024280.2 | Barley | extracellular | 70.06 | 68.97 |
| HORVU2Hr1G044340.1 | Barley | extracellular | 69.75 | 68.87 |
| HORVU2Hr1G018520.1 | Barley | extracellular | 69.11 | 68.67 |
| PGSC0003DMT400068341 | Potato | extracellular | 64.97 | 64.56 |
| KRH40790 | Soybean | extracellular | 64.97 | 63.35 |
| KRH00399 | Soybean | extracellular | 63.69 | 63.29 |
| HORVU2Hr1G018530.1 | Barley | extracellular, vacuole | 68.47 | 63.24 |
| KRH30142 | Soybean | extracellular | 64.33 | 63.12 |
| KRG98181 | Soybean | extracellular | 64.33 | 63.12 |
| VIT_08s0058g00970.t01 | Wine grape | extracellular | 52.87 | 63.12 |
| KRH72788 | Soybean | endoplasmic reticulum, vacuole | 63.69 | 62.5 |
| VIT_08s0058g00980.t01 | Wine grape | extracellular | 52.23 | 62.36 |
| HORVU2Hr1G018550.3 | Barley | extracellular | 66.56 | 62.2 |
| KRH00400 | Soybean | extracellular | 63.69 | 62.11 |
| HORVU4Hr1G090050.1 | Barley | extracellular, plasma membrane | 65.29 | 61.75 |
| Solyc05g050880.2.1 | Tomato | extracellular | 61.78 | 61.2 |
| KRH17142 | Soybean | extracellular, vacuole | 61.78 | 60.81 |
| Solyc09g018590.1.1 | Tomato | extracellular | 48.09 | 60.4 |
| VIT_06s0004g07740.t01 | Wine grape | cytosol, extracellular, nucleus | 50.32 | 60.08 |
| GSMUA_Achr7P22220_001 | Banana | extracellular | 55.1 | 59.86 |
| VIT_18s0001g06850.t01 | Wine grape | extracellular | 60.19 | 59.62 |
| Solyc06g082420.2.1 | Tomato | extracellular | 59.24 | 59.62 |
| PGSC0003DMT400018003 | Potato | extracellular | 51.27 | 58.97 |
| VIT_18s0001g06890.t01 | Wine grape | extracellular | 49.36 | 58.94 |
| KRH40791 | Soybean | endoplasmic reticulum, extracellular, plastid | 64.01 | 58.77 |
| PGSC0003DMT400078121 | Potato | extracellular | 57.96 | 58.33 |
| KRH65489 | Soybean | extracellular | 60.51 | 57.58 |
| VIT_18s0001g06840.t01 | Wine grape | extracellular | 57.32 | 56.6 |
| HORVU6Hr1G009360.1 | Barley | extracellular | 56.05 | 54.66 |
| KRG92979 | Soybean | extracellular | 57.64 | 54.35 |
| HORVU6Hr1G010340.1 | Barley | extracellular | 57.32 | 54.05 |
| KRH65488 | Soybean | extracellular | 56.05 | 53.99 |
| HORVU6Hr1G009500.3 | Barley | extracellular | 55.1 | 53.73 |
| HORVU6Hr1G026600.2 | Barley | plastid | 55.41 | 53.54 |
| HORVU4Hr1G022270.1 | Barley | extracellular | 54.14 | 52.96 |
| HORVU7Hr1G077880.1 | Barley | extracellular | 53.82 | 52.32 |
| HORVU7Hr1G089310.1 | Barley | extracellular | 53.18 | 52.19 |
| HORVU7Hr1G116550.5 | Barley | extracellular | 54.14 | 51.36 |
| HORVU7Hr1G089360.2 | Barley | extracellular | 44.59 | 51.28 |
| HORVU7Hr1G108530.1 | Barley | extracellular | 55.41 | 51.03 |
| HORVU7Hr1G089480.2 | Barley | extracellular | 50.64 | 50.64 |
| HORVU7Hr1G089320.1 | Barley | extracellular | 50.96 | 49.84 |
| HORVU4Hr1G052060.1 | Barley | mitochondrion | 57.01 | 48.38 |
| HORVU3Hr1G026010.4 | Barley | plastid | 51.27 | 44.11 |
| HORVU6Hr1G021520.1 | Barley | plastid | 49.68 | 40.21 |
Protein Annotations
| KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | EMBL:AK355507 | EMBL:AK359657 |
| EMBL:AK359938 | EMBL:AK361691 | EMBL:AK368489 | UniProt:F2CV55 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0020037 |
| GO:GO:0042744 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 | EnsemblPlantsGene:HORVU2Hr1G018440 | EnsemblPlants:HORVU2Hr1G018440.1 |
| InterPro:Haem_peroxidase | InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 | PFAM:PF00141 | PRINTS:PR00458 | PRINTS:PR00461 |
| ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 | PANTHER:PTHR31388 | PANTHER:PTHR31388:SF96 | InterPro:Peroxidase_pln |
| InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 | InterPro:Secretory_peroxidase | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002004957 | SEG:seg | : | : | : | : |
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:F2CV55]
Coordinates
chrchr2H:-:47246040..47247612
Molecular Weight (calculated)
33043.1 Da
IEP (calculated)
7.659
GRAVY (calculated)
-0.003
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSSLSVV LLLCLAVAAS AQLSPTFYQT TCPNALSTIK AAVTAAVNKE NRMGASLLRL HFHDCFVQGC DASVLLSGME QNAAPNVMSL RGFEVIDSIK
101: AKLETMCKQT VSCADILTVA ARDSVVALGG PSWTVPLGRR DSTNANEAAA NSDLPPPFFD LVNLTQSFGN KGFTVTDMVA LSGAHTIGQA QCQNFRDRLY
201: NETNINSGFA TSLKANCPRP TGSGDRNLAN LDVSTPYSFD NAYYSNLKSQ KGLLHSDQVL FTGTGGGTDN IVNNFASNPA AFSGAFASAM VKMGNLSPLT
301: GSQGQVRLNC SKVN
101: AKLETMCKQT VSCADILTVA ARDSVVALGG PSWTVPLGRR DSTNANEAAA NSDLPPPFFD LVNLTQSFGN KGFTVTDMVA LSGAHTIGQA QCQNFRDRLY
201: NETNINSGFA TSLKANCPRP TGSGDRNLAN LDVSTPYSFD NAYYSNLKSQ KGLLHSDQVL FTGTGGGTDN IVNNFASNPA AFSGAFASAM VKMGNLSPLT
301: GSQGQVRLNC SKVN
001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN
Arabidopsis Description
PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.