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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 26928395
msms PMID: 26928395 doi
A Sultan, B Andersen, B Svensson, C Finnie
Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G044340.1 Barley extracellular 100.0 99.06
TraesCS2B01G124800.1 Wheat extracellular 93.97 93.67
TraesCS2D01G107800.1 Wheat extracellular 85.71 86.54
TraesCS2A01G107700.1 Wheat extracellular 84.13 83.07
TraesCS2B01G125200.1 Wheat extracellular 88.57 82.3
TraesCS2A01G107500.1 Wheat extracellular 86.67 80.53
HORVU2Hr1G024280.2 Barley extracellular 80.63 79.62
Os07t0677500-00 Rice extracellular 76.19 77.17
Os07t0677300-01 Rice extracellular 74.29 74.52
Os07t0677200-01 Rice extracellular 73.97 73.5
HORVU2Hr1G018570.1 Barley extracellular 70.48 70.93
HORVU2Hr1G018520.1 Barley extracellular 70.16 69.94
HORVU2Hr1G018440.1 Barley extracellular 69.52 69.75
HORVU2Hr1G044360.1 Barley extracellular 69.52 69.75
EER97731 Sorghum extracellular 65.71 66.13
Zm00001d007160_P001 Maize extracellular 66.35 65.31
Zm00001d007161_P001 Maize extracellular 65.08 65.29
Zm00001d022456_P001 Maize extracellular 50.48 62.6
HORVU2Hr1G018530.1 Barley extracellular, vacuole 64.13 59.41
HORVU4Hr1G090050.1 Barley extracellular, plasma membrane 62.54 59.34
KRH40790 Soybean extracellular 60.63 59.32
KRH00400 Soybean extracellular 60.63 59.32
KRH00399 Soybean extracellular 59.05 58.86
VIT_08s0058g00980.t01 Wine grape extracellular 48.57 58.17
PGSC0003DMT400068341 Potato extracellular 58.1 57.91
GSMUA_Achr7P22220_001 Banana extracellular 52.38 57.09
VIT_08s0058g00970.t01 Wine grape extracellular 47.62 57.03
VIT_06s0004g07740.t01 Wine grape cytosol, extracellular, nucleus 47.62 57.03
HORVU2Hr1G018550.3 Barley extracellular 59.68 55.95
VIT_18s0001g06840.t01 Wine grape extracellular 55.87 55.35
KRH40791 Soybean endoplasmic reticulum, extracellular, plastid 59.37 54.68
VIT_18s0001g06890.t01 Wine grape extracellular 45.4 54.37
Solyc05g050880.2.1 Tomato extracellular 54.6 54.26
VIT_18s0001g06850.t01 Wine grape extracellular 54.6 54.26
Solyc09g018590.1.1 Tomato extracellular 42.86 54.0
KRH65489 Soybean extracellular 56.51 53.94
PGSC0003DMT400018003 Potato extracellular 46.67 53.85
Solyc06g082420.2.1 Tomato extracellular 53.02 53.53
HORVU6Hr1G009360.1 Barley extracellular 54.6 53.42
KRH17142 Soybean extracellular, vacuole 53.65 52.98
KRH72788 Soybean endoplasmic reticulum, vacuole 53.65 52.81
HORVU6Hr1G026600.2 Barley plastid 54.29 52.62
PGSC0003DMT400078121 Potato extracellular 52.06 52.56
KRG98181 Soybean extracellular 53.33 52.5
KRH30142 Soybean extracellular 53.02 52.19
HORVU6Hr1G009500.3 Barley extracellular 53.33 52.17
KRG92979 Soybean extracellular 53.65 50.75
HORVU7Hr1G089310.1 Barley extracellular 51.43 50.62
KRH65488 Soybean extracellular 52.38 50.61
HORVU7Hr1G108530.1 Barley extracellular 54.6 50.44
HORVU7Hr1G089320.1 Barley extracellular 50.48 49.53
HORVU7Hr1G089360.2 Barley extracellular 42.86 49.45
HORVU7Hr1G089480.2 Barley extracellular 49.21 49.36
HORVU4Hr1G052060.1 Barley mitochondrion 57.78 49.19
HORVU6Hr1G010340.1 Barley extracellular 51.43 48.65
HORVU4Hr1G022270.1 Barley extracellular 49.52 48.6
HORVU7Hr1G077880.1 Barley extracellular 48.25 47.06
HORVU7Hr1G116550.5 Barley extracellular 48.89 46.53
HORVU6Hr1G021520.1 Barley plastid 52.7 42.78
HORVU3Hr1G026010.4 Barley plastid 48.89 42.19
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1GO:GO:0003674GO:GO:0003824
GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950GO:GO:0006979
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0020037
GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869EnsemblPlantsGene:HORVU2Hr1G018480EnsemblPlants:HORVU2Hr1G018480.1
InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016UniProt:M0WYK6PFAM:PF00141PRINTS:PR00458
PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF46
InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTM
UniParc:UPI000009EB4ESEG:seg::::
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:M0WYK6]
Coordinates
chrchr2H:+:47285787..47287555
Molecular Weight (calculated)
32991.9 Da
IEP (calculated)
6.493
GRAVY (calculated)
0.008
Length
315 amino acids
Sequence
(BLAST)
001: MASSSYTSLL VLVALVTAAS AQLSPTFYDT SCPRALATIK SGVMAAVTSD PRMGASLLRL HFHDCFVQGC DASVLLSGME QNAIPNAGSL RGFGVIDSIK
101: TQIEAICKQT VSCADILTVA ARDSVVALGG PSWTVPLGRR DSIDANENEA NTDLPGFNSS RAELEAAFLK KGGLNTVDMV ALSGAHTIGQ AQCSTFRARI
201: YGGDTNINTA YAASLRANCP QTVGSGDGSL ANLDTTTANT FDNAYYTNLM SQKGLLHSDQ VLFNNDTTDN TVRNFASNPA AFSSAFTTAM IKMGNIAPKT
301: GTQGQIRLSC SRVNS
Best Arabidopsis Sequence Match ( AT1G14540.1 )
(BLAST)
001: MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID
101: QAKSAVESVC PGVVSCADII AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD LVALSGAHTL GQAQCLTFKG
201: RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL
301: TGSDGQIRRI CSAVN
Arabidopsis Description
PER4Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WND9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.