Factsheet for HORVU2Hr1G095340.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

mitochondrion 2
golgi 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, plasma membrane
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G095360.2	Barley	plastid	89.61	28.16
Zm00001d035210_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	40.26	8.93
TraesCS2B01G621500.1	Wheat	extracellular	5.19	4.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G095340.2	EnsemblPlantsGene:HORVU2Hr1G095340	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:ORMDL	PANTHER:PTHR12665
PANTHER:PTHR12665:SF14	PFAM:PF04061	TMHMM:TMhelix	UniParc:UPI000B460890	UniProt:A0A287J0R8	MapMan:35.2

Description

No Description!

Coordinates

chrchr2H:-:669277585..669281134

Molecular Weight (calculated)

8907.2 Da

IEP (calculated)

10.637

GRAVY (calculated)

0.075

Length

77 amino acids

Sequence
(BLAST)

1: MYNRLTWWEQ MDNGKQLTRN RKFLVVVPVV LYLIASHTTD YQHPMLFLNT IAVIVLVVAK LPNMHKVRIP PPPPAGN

Best Arabidopsis Sequence Match ( AT5G42000.1 )
(BLAST)

001: MYVRALPTTD VNRNTEWFTY PGVWTTYILI LFFSWLLVLS VFHCSPGIAW TIVHLAHFTV TYHSFHWKKG TPFGDDQGVY NRLTWWEQID NGKQLTRNRK
101: FLTVVPVVLY LIASHTTDYQ HPMLFLNTLA VFVMVVAKFP HMHKVRIFGI NGDQ

Arabidopsis Description

At5g42000 [Source:UniProtKB/TrEMBL;Acc:Q9FHY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.