Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G095340.2 | Barley | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 8.93 | 40.26 |
| Zm00001d017574_P001 | Maize | plasma membrane | 16.14 | 35.67 |
| Zm00001d019576_P001 | Maize | plasma membrane | 15.27 | 32.72 |
| Zm00001d005396_P002 | Maize | plasma membrane | 14.99 | 32.1 |
| TraesCS2B01G621500.1 | Wheat | extracellular | 7.2 | 25.0 |
Protein Annotations
| EnsemblPlants:Zm00001d035210_P001 | EnsemblPlants:Zm00001d035210_T001 | EnsemblPlantsGene:Zm00001d035210 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ORMDL |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF14 | PFAM:PF04061 | ProteinID:AQK78537.1 | SEG:seg | UniParc:UPI000220C9CF |
| UniProt:K7VHB5 | MapMan:35.2 | : | : | : | : |
Description
ORMDL family protein
Coordinates
chr6:+:9959798..9963871
Molecular Weight (calculated)
38771.7 Da
IEP (calculated)
10.215
GRAVY (calculated)
-0.712
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MWLGEQSQFF SQISAMQLST QSFMSSGHRQ ISLLPQLHWQ NYFTKLCIKI TYHFFHWKKG TPFADDQGMY NALTWWEQMD NGKQLTRNRK FLIVVHVVLY
101: VVDGREAGHG WRGASRGAAI SIGRRRGVDV GAAGGALAIH VEEAGMHVEV GALDNEEGGG DTRTFRYLAK DAMRFGDSAE NTGKTAGTRG GSRIRWHGRE
201: EARIGGVRFL QWTEEGRSAH LVVFVAGNRP DEDPAKGPTK ALGIGQRTPN CDLVNGCLGR RGHRFRPRRQ HRSWHHRRGR PLASGHGRRR LDEGRAGEEG
301: VAMDDWAMDE CWRIQPREGD GRADGGPRIE RRGFVMNDGG GGTDGVD
101: VVDGREAGHG WRGASRGAAI SIGRRRGVDV GAAGGALAIH VEEAGMHVEV GALDNEEGGG DTRTFRYLAK DAMRFGDSAE NTGKTAGTRG GSRIRWHGRE
201: EARIGGVRFL QWTEEGRSAH LVVFVAGNRP DEDPAKGPTK ALGIGQRTPN CDLVNGCLGR RGHRFRPRRQ HRSWHHRRGR PLASGHGRRR LDEGRAGEEG
301: VAMDDWAMDE CWRIQPREGD GRADGGPRIE RRGFVMNDGG GGTDGVD
001: MYVRALPTTD VNRNTEWFTY PGVWTTYILI LFFSWLLVLS VFHCSPGIAW TIVHLAHFTV TYHSFHWKKG TPFGDDQGVY NRLTWWEQID NGKQLTRNRK
101: FLTVVPVVL
101: FLTVVPVVL
Arabidopsis Description
At5g42000 [Source:UniProtKB/TrEMBL;Acc:Q9FHY3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.