Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98458 | Sorghum | cytosol, golgi, plasma membrane | 98.15 | 98.15 |
| Zm00001d005396_P002 | Maize | plasma membrane | 97.53 | 97.53 |
| Os07t0452500-02 | Rice | plasma membrane | 93.83 | 92.68 |
| Bra028519.1-P | Field mustard | cytosol, golgi, plasma membrane | 76.54 | 80.52 |
| CDX67521 | Canola | cytosol, golgi, plasma membrane | 76.54 | 80.52 |
| AT5G42000.1 | Thale cress | plasma membrane | 76.54 | 80.52 |
| Zm00001d017574_P001 | Maize | plasma membrane | 77.78 | 80.25 |
| VIT_15s0046g00140.t01 | Wine grape | cytosol, golgi, plasma membrane | 77.78 | 80.25 |
| GSMUA_Achr5P10520_001 | Banana | cytosol, golgi, plasma membrane | 77.78 | 80.25 |
| Solyc01g096130.2.1 | Tomato | cytosol, golgi, plasma membrane | 77.16 | 80.13 |
| CDY13373 | Canola | cytosol, golgi, plasma membrane | 75.93 | 79.87 |
| PGSC0003DMT400000662 | Potato | cytosol, golgi, plasma membrane | 76.54 | 79.49 |
| CDY61368 | Canola | cytosol, golgi, plasma membrane | 75.31 | 79.22 |
| Bra027719.1-P | Field mustard | cytosol, golgi, plasma membrane | 75.31 | 79.22 |
| KRH06440 | Soybean | cytosol, golgi, plasma membrane | 76.54 | 78.98 |
| PGSC0003DMT400031602 | Potato | cytosol, golgi, plasma membrane | 76.54 | 78.98 |
| Solyc08g082920.2.1 | Tomato | cytosol, golgi, plasma membrane | 76.54 | 78.98 |
| CDY65660 | Canola | endoplasmic reticulum, golgi, plasma membrane | 75.31 | 78.71 |
| GSMUA_Achr9P19180_001 | Banana | cytosol, peroxisome, plasma membrane | 79.63 | 78.66 |
| KRH47879 | Soybean | mitochondrion | 75.93 | 78.34 |
| VIT_02s0025g02260.t01 | Wine grape | cytosol, golgi, plasma membrane | 74.69 | 77.07 |
| KRH06313 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 74.07 | 76.43 |
| PGSC0003DMT400012896 | Potato | cytosol, golgi, plasma membrane | 72.22 | 74.52 |
| Zm00001d035210_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 32.72 | 15.27 |
Protein Annotations
| EntrezGene:100273730 | EntrezGene:100856955 | MapMan:35.2 | UniProt:B6TIF4 | EMBL:BT061908 | EMBL:EU964769 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | ProteinID:ONM53273.1 | InterPro:ORMDL | PFAM:PF04061 | PIRSF:PIRSF018147 |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF15 | TMHMM:TMhelix | UniParc:UPI000182D9FB | EnsemblPlantsGene:Zm00001d019576 | EnsemblPlants:Zm00001d019576_P001 |
| EnsemblPlants:Zm00001d019576_T001 | SEG:seg | : | : | : | : |
Description
ORMDL family protein
Coordinates
chr7:-:43879919..43882845
Molecular Weight (calculated)
18679.8 Da
IEP (calculated)
9.299
GRAVY (calculated)
0.233
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRGEPYYV EAAPPVDVNK NTEWFMYPGV WTTYILLLFF AWLLVLSVSG CSPGAAWTVV NLAHFAITYH FFHWKKGTPF AADDQGIYSR LTWWEQIDNG
101: QQLTRNRKFL TVVPVVLYLI ASHLTDYKQP MFFLNTMAVF VLVVAKLPNM HKVRIFGING DI
101: QQLTRNRKFL TVVPVVLYLI ASHLTDYKQP MFFLNTMAVF VLVVAKLPNM HKVRIFGING DI
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.