Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- golgi 2
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P19180_001 | Banana | cytosol, peroxisome, plasma membrane | 92.36 | 88.41 |
| VIT_15s0046g00140.t01 | Wine grape | cytosol, golgi, plasma membrane | 84.71 | 84.71 |
| GSMUA_Achr2P03330_001 | Banana | cytosol, golgi, plasma membrane | 82.17 | 83.23 |
| KRH47879 | Soybean | mitochondrion | 82.8 | 82.8 |
| Solyc08g082920.2.1 | Tomato | cytosol, golgi, plasma membrane | 82.17 | 82.17 |
| PGSC0003DMT400031602 | Potato | cytosol, golgi, plasma membrane | 82.17 | 82.17 |
| Solyc01g096130.2.1 | Tomato | cytosol, golgi, plasma membrane | 81.53 | 82.05 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 80.89 | 81.94 |
| KRH06440 | Soybean | cytosol, golgi, plasma membrane | 81.53 | 81.53 |
| VIT_02s0025g02260.t01 | Wine grape | cytosol, golgi, plasma membrane | 80.89 | 80.89 |
| PGSC0003DMT400000662 | Potato | cytosol, golgi, plasma membrane | 80.25 | 80.77 |
| Bra027719.1-P | Field mustard | cytosol, golgi, plasma membrane | 78.34 | 79.87 |
| CDY61368 | Canola | cytosol, golgi, plasma membrane | 78.34 | 79.87 |
| KRH06313 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 79.62 | 79.62 |
| GSMUA_Achr9P00900_001 | Banana | golgi, plasma membrane, plastid | 78.34 | 79.35 |
| CDY65660 | Canola | endoplasmic reticulum, golgi, plasma membrane | 78.34 | 79.35 |
| AT5G42000.1 | Thale cress | plasma membrane | 77.71 | 79.22 |
| CDX67521 | Canola | cytosol, golgi, plasma membrane | 77.71 | 79.22 |
| Bra028519.1-P | Field mustard | cytosol, golgi, plasma membrane | 77.71 | 79.22 |
| Zm00001d005396_P002 | Maize | plasma membrane | 81.53 | 79.01 |
| CDY13373 | Canola | cytosol, golgi, plasma membrane | 77.07 | 78.57 |
| Os07t0452500-02 | Rice | plasma membrane | 81.53 | 78.05 |
| Zm00001d019576_P001 | Maize | plasma membrane | 80.25 | 77.78 |
| EER98458 | Sorghum | cytosol, golgi, plasma membrane | 80.25 | 77.78 |
| PGSC0003DMT400012896 | Potato | cytosol, golgi, plasma membrane | 77.07 | 77.07 |
| GSMUA_Achr1P03940_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 29.94 | 73.44 |
| GSMUA_Achr9P20890_001 | Banana | golgi, plasma membrane | 84.08 | 55.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P10520_001 | EnsemblPlants:GSMUA_Achr5T10520_001 | EnsemblPlantsGene:GSMUA_Achr5G10520_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ORMDL |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF14 | PFAM:PF04061 | PIRSF:PIRSF018147 | TMHMM:TMhelix | UniParc:UPI0002955F96 |
| UniProt:M0SXD1 | MapMan:35.2 | : | : | : | : |
Description
Putative ORM1-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G10520_001]
Coordinates
chr5:-:7528106..7530952
Molecular Weight (calculated)
18280.5 Da
IEP (calculated)
9.807
GRAVY (calculated)
0.310
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLYVQAVP PVDMNKNTEW FMYPGVWTTY ILILFFSWLV FLSIFGCNPG TAWTIVNLVH FAITYHFFHW KKGTPFSDDQ GIYNSLTWWE QIDNGKQLTR
101: NRKFLTVVPV VLYLIASHTT DYRHPMLFLN TVAVIVLVIA KLPNMHKVRI FGINAGH
101: NRKFLTVVPV VLYLIASHTT DYRHPMLFLN TVAVIVLVIA KLPNMHKVRI FGINAGH
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.