Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- mitochondrion 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g096130.2.1 | Tomato | cytosol, golgi, plasma membrane | 98.72 | 98.72 |
| VIT_15s0046g00140.t01 | Wine grape | cytosol, golgi, plasma membrane | 87.82 | 87.26 |
| TraesCS2A01G402300.1 | Wheat | endoplasmic reticulum | 71.79 | 86.15 |
| PGSC0003DMT400031602 | Potato | cytosol, golgi, plasma membrane | 86.54 | 85.99 |
| Os02t0673600-01 | Rice | cytosol, golgi, plasma membrane | 84.62 | 84.08 |
| KRH47879 | Soybean | mitochondrion | 84.62 | 84.08 |
| KRH06440 | Soybean | cytosol, golgi, plasma membrane | 84.62 | 84.08 |
| Os04t0567700-01 | Rice | plasma membrane | 83.97 | 83.44 |
| EES05737 | Sorghum | cytosol, golgi, plasma membrane | 83.33 | 82.8 |
| TraesCS2D01G399600.1 | Wheat | plasma membrane | 83.33 | 82.8 |
| TraesCS2B01G420500.1 | Wheat | plasma membrane | 83.33 | 82.8 |
| KRH06313 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 82.69 | 82.17 |
| Zm00001d017574_P001 | Maize | plasma membrane | 82.69 | 82.17 |
| EES11276 | Sorghum | cytosol, golgi, plasma membrane | 82.69 | 82.17 |
| GSMUA_Achr5P10520_001 | Banana | cytosol, golgi, plasma membrane | 80.77 | 80.25 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 79.49 | 80.0 |
| PGSC0003DMT400012896 | Potato | cytosol, golgi, plasma membrane | 80.13 | 79.62 |
| TraesCS4A01G211000.1 | Wheat | cytosol, golgi, plasma membrane | 57.05 | 79.46 |
| GSMUA_Achr2P03330_001 | Banana | cytosol, golgi, plasma membrane | 78.85 | 79.35 |
| GSMUA_Achr9P19180_001 | Banana | cytosol, peroxisome, plasma membrane | 83.33 | 79.27 |
| GSMUA_Achr9P00900_001 | Banana | golgi, plasma membrane, plastid | 76.92 | 77.42 |
| Zm00001d005396_P002 | Maize | plasma membrane | 80.13 | 77.16 |
| TraesCS3D01G052200.1 | Wheat | cytosol, extracellular, golgi | 55.13 | 76.79 |
| Zm00001d019576_P001 | Maize | plasma membrane | 79.49 | 76.54 |
| Os07t0452500-02 | Rice | plasma membrane | 80.13 | 76.22 |
| EER98458 | Sorghum | cytosol, golgi, plasma membrane | 78.85 | 75.93 |
| TraesCS7D01G189300.1 | Wheat | cytosol, extracellular, golgi | 44.87 | 75.27 |
| GSMUA_Achr9P20890_001 | Banana | golgi, plasma membrane | 82.69 | 53.75 |
| HORVU2Hr1G095360.2 | Barley | plastid | 82.69 | 52.65 |
| TraesCS6D01G104100.1 | Wheat | mitochondrion | 36.54 | 31.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400000662 | EnsemblPlantsGene:PGSC0003DMG400000236 | EntrezGene:102588736 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ORMDL |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF14 | PFAM:PF04061 | PGSC:PGSC0003DMG400000236 | PIRSF:PIRSF018147 | RefSeq:XP_006339732.1 |
| TMHMM:TMhelix | UniParc:UPI00029620D4 | UniProt:M0ZH44 | MapMan:35.2 | : | : |
Description
Ormdl [Source:PGSC_GENE;Acc:PGSC0003DMG400000236]
Coordinates
chr1:-:73705962..73712324
Molecular Weight (calculated)
18174.2 Da
IEP (calculated)
9.344
GRAVY (calculated)
0.169
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNLYVKAVP PADLNRNTDW FMYPGVWTTY ILILFFSWLV LTAFGCSPGM AWTVVNLSHF IVTYHFFHWK KGTPFADDQG MYNQLTWWEQ IDNGKQLTRN
101: RKFLTVVPVV LYLIASHTTD YQQPMLFFNT IAVTVMVVAK FPNMHKVRIF GINGDP
101: RKFLTVVPVV LYLIASHTTD YQQPMLFFNT IAVTVMVVAK FPNMHKVRIF GINGDP
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.